Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02036 ATGGTGTTCAGAATAGCATTTCTGGTAGTTGTGTGTGTTCTTCCAGCAATGGTTGCAGCCATTCGCCCTAACAAGAACCCTTTCTGCGTGAAAGGTCGCGTCTACTGTGACCCTTGCCGTGCTGGTTTTGAGACCAACGCCACCACCTACATTGCCGGTAACCCCTTTTTCTGTGCCGAGGTGATTTTGCAATGCAGAGATACAGCCACAAATGACATTGTGTATAGCAAGCAAGTTAAGAGTGGGTCATCAGGAGAATTTAAGATCTTCGTTGATGAGAAACTGGAAGGTCAGATTTGTGAAGCCAGGCTTGTAAGCAGTCCTCTATATGATTGCAATGAAGCCACCCCTGGGCGTGACCACTCCCGTGTTCTTCTCAACCGCTTCAATGGTCTTGCCACCAGTGATAGATTTATCAATAATATGGGTTTCATGAAGAAGGATGTTGCATCTTCATGCGCAGAGATTCTAAAGCTTAACCAGAAGCTCGATCGTGAGAATTTAATTTCTAAATTTTAA 519 0.447 MVFRIAFLVVVCVLPAMVAAIRPNKNPFCVKGRVYCDPCRAGFETNATTYIAGNPFFCAEVILQCRDTATNDIVYSKQVKSGSSGEFKIFVDEKLEGQICEARLVSSPLYDCNEATPGRDHSRVLLNRFNGLATSDRFINNMGFMKKDVASSCAEILKLNQKLDRENLISKF. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02036 172 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 7 158 IPR006041 -
Seca8g02036 172 Pfam Pollen protein Ole e 1 like 30 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02036 Seca-Chr8 43518267 43519949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02036 - - gmx:100796594 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02036 8 43518267 43519949 Seca8g02036 8 43518267 43519949 ECH
Seca8g02036 8 43518267 43519949 Seca4g02772 4 47764563 47766928 PCT