Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02772 ATGGCTTCCAGAGTAGCCTTGTTCCTGGCTATGTGCGTTCTTCCGGCGATGGTTGTAGCCATTCGCCCCGCCAAGAACCCTTTCTGCGTGAAGGGTCGTGTCTACTGTGACCCATGCCGCGCTGGTTTTGAGACCACCGCCACCACTCACATTGCTGGTGCGGAGGTTATGCTGCAATGCAAGGACAAGAACACCAATGAAGTTGTGTACACAAAGAAGGGCTGGAGCGACTCAACAGGAGCATACACAATCTTCGTGGATGAGGATCATGCGGATCAGATCTGTGATGCCAAGCTTGTGAGCAGTCCTCAGCATAACTGTAAAGAAGCCACCCCAGGCCGTGACCAAGCCCGTGTTATCCTCACCGGCTACAATGGCATTGCCTCTAATGATAGGTTTGCCAATGCCATGGGCTTCATGGCACAGGAGGCTGCATCTGGCTGTGCTGAGGTACTCAGGCAATACGAGGAGTTCGATAATGAGAATTAA 489 0.5256 MASRVALFLAMCVLPAMVVAIRPAKNPFCVKGRVYCDPCRAGFETTATTHIAGAEVMLQCKDKNTNEVVYTKKGWSDSTGAYTIFVDEDHADQICDAKLVSSPQHNCKEATPGRDQARVILTGYNGIASNDRFANAMGFMAQEAASGCAEVLRQYEEFDNEN. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02772 162 Pfam Pollen protein Ole e 1 like 30 112 - -
Seca4g02772 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 6 157 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02772 Seca-Chr4 47764563 47766928 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02772 - - gmx:100499710 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02772 4 47764563 47766928 Seca4g02772 4 47764563 47766928 ECH
Seca8g02036 8 43518267 43519949 Seca4g02772 4 47764563 47766928 PCT