Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02035 ATGGCTGCTGAAGTATATCACCAGGCTATTGGGGCTTTTCAATCCAATTCCTATCTCAACAATTTTAGTCATCACCAAAAGCTTCGGAACAATTTGGTAAAACTGGTGACTAAGGATAACTACCTCTCAAGGACAAGAACTAGTCACTCTGGCCAGAGGAATTGCAGTGTAATTCTATCTTCAGCTTCTCAAACATCAATTGTTGATACAGTGTCATCCCCTTCAAGAATCAATACTACTGACACTCACAAGAAATCAAGTGAAGCTGCCTTGATCCTTATTCGACATGGTGAGTCCTTGTGGAATGAGAAGAACTTATTCACTGGTTGTGTTGATGTTCCACTAAGCAAGAAAGGCATAGATGAGGCAATTGAGGCTGGCAAAAGAATAAGCAGTATTCCCGTGGATGTCATATTTACATCTGCTTTAATTCGTGCACAAATGACAGCCATGCTTGCCATGACACAGCACCGTCGTAGGAAGGTGCCTATCATAATGCACAATGAGAGTGAACAAGCAAAGGAATGGAGTCAAGTTTTTAGTGAAGACACAAAAAAGCAATCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGACCTATATATGCCTTAAATGTTATCATTTTAGGTATGGGGAGCTACAGGGTCTCAATAAGCAAGAAACAGCAGACAAATTTGGGAAAGAACAAGTCCATGAATGGCGCCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTCAAAGGGCAGTTGCCTATTTTAGAGACCATATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTGCAGCCCATGGAAATTCACTGAGATCCATTATCATGTATCTAGACAAACTAACTTCCCAAGAGGTTATTAGTTTAGAATTGTCAACTGGAATTCCAATGCTTTATATTCTCAAAGAAGGGAGATTCATTAGGAGGGGGAGTCCCGTAGGACCAACTGAAGCTGGAGTTTATGCCTATACAAGGGGTTTGGCTCTTTACAGGCAGAGGTTGGATGATATGATCCAATAA 1059 0.4051 MAAEVYHQAIGAFQSNSYLNNFSHHQKLRNNLVKLVTKDNYLSRTRTSHSGQRNCSVILSSASQTSIVDTVSSPSRINTTDTHKKSSEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQAKEWSQVFSEDTKKQSIPVIAAWQLNERMTYICLKCYHFRYGELQGLNKQETADKFGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDHIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYILKEGRFIRRGSPVGPTEAGVYAYTRGLALYRQRLDDMIQ. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02035 352 Gene3D - 80 324 IPR029033 -
Seca8g02035 352 Pfam Histidine phosphatase superfamily (branch 1) 212 304 IPR013078 -
Seca8g02035 352 Pfam Histidine phosphatase superfamily (branch 1) 91 165 IPR013078 -
Seca8g02035 352 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 93 102 IPR001345 GO:0003824
Seca8g02035 352 SMART PGAM_5 90 287 IPR013078 -
Seca8g02035 352 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 88 326 IPR005952 GO:0006096|GO:0016868
Seca8g02035 352 SUPERFAMILY Phosphoglycerate mutase-like 91 318 IPR029033 -
Seca8g02035 352 CDD HP_PGM_like 91 321 IPR013078 -
Seca8g02035 352 PANTHER PHOSPHOGLYCERATE MUTASE 82 338 IPR005952 GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02035 Seca-Chr8 43422366 43427032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02035 K01834 - gmx:100802621 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02035 8 43422366 43427032 Seca8g02035 8 43422366 43427032 ECH
Seca8g02035 8 43422366 43427032 Seca4g02773 4 47804306 47808800 PCT