Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02034 ATGTTATCCATTTTTCTAGTTTTTTCTTATTTATTTGGAGTGCAGAACTCAAAGTCAACAAAAGGACAAATTAAGTATTTGGTATATTGCATGGAGAATGCTATTTTAAATCTTCCGCCAGAACAGGAACAGATGGTCTGGCTGATTGACTTCCAGGGTTTCAATATGTCACATATATCAATCAAGGTGACACGTGAAACTGCCCATGTATTACAAGAACATTATCCTGAACGGCTGGGTCTGGCAATCCTGTACAATGCACCTAAGTTCTTTGAACCATTCTTCACGATGGTAAAGCCCATATTAGAGCCCAAGACTTATAATAAAGTCAAGTTCGGTTACTCTGATGATCCAAACACCAAGAAGATTATGGAGGATTTGTTTGATTTGGACCATCTTGAATCTGCATTCGGTGGGAATGATGATACAGTATTTGACATAAGTAAATATGCTGAGAGAATGAAAGAGGATGATAAGAAGATTCCCTCTTTCTGGACAAGGGAAAACTCTACATCCTCAGTTCCAAACGATGCTCCTCCTTCTCTGGATTCCATTAGGTTAGACACAGACTCTGATGCTTCTGACAATGAGAAAGTAGACTGTTCCCCTGACCCTGGCATGGATACTGGCATCACTGACCCTGATCAGAATATCTTAGTTAATCAAGGGGAAGGAATTGCCAGTGCAGCTATGCATTAG 699 0.3991 MLSIFLVFSYLFGVQNSKSTKGQIKYLVYCMENAILNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFTMVKPILEPKTYNKVKFGYSDDPNTKKIMEDLFDLDHLESAFGGNDDTVFDISKYAERMKEDDKKIPSFWTRENSTSSVPNDAPPSLDSIRLDTDSDASDNEKVDCSPDPGMDTGITDPDQNILVNQGEGIASAAMH. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02034 232 CDD SEC14 15 140 IPR001251 -
Seca8g02034 232 MobiDBLite consensus disorder prediction 188 202 - -
Seca8g02034 232 Gene3D - 5 172 IPR036865 -
Seca8g02034 232 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 1 145 IPR001251 -
Seca8g02034 232 SMART sec14_4 2 142 IPR001251 -
Seca8g02034 232 MobiDBLite consensus disorder prediction 165 179 - -
Seca8g02034 232 MobiDBLite consensus disorder prediction 162 216 - -
Seca8g02034 232 SUPERFAMILY CRAL/TRIO domain 9 160 IPR036865 -
Seca8g02034 232 PANTHER GH16843P 10 171 - -
Seca8g02034 232 Pfam CRAL/TRIO domain 16 139 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02034 Seca-Chr8 43418826 43421197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02034 K26544 - gmx:100780151 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02034 8 43418826 43421197 Seca8g02034 8 43418826 43421197 ECH
Seca8g02034 8 43418826 43421197 Seca4g02775 4 47810873 47812320 PCT