Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02775 ATGAGTTTGGATGTTAAGAAAACTGCCTTCGATGGTCATGAGAAAATGTTACTATCACAAGAACAGCAGGCAAAGATTATTGAGGTGAGAAGGTTGATAGGGCCATTGTCAGATAAGGCATCTGTGTATTGTTCTGATGCATCCATCTCAAGGTATTTAAGAACAAAAAATTGGAATGTAAAGAAGGCAGCTCAAATGTTGAAACAGAGCCTGAAATGGAGAGAAGAATACAAACCTGAAGAGATCTGTTGGGTGAGTTACTGTTTGTCTTCTCCTTTTCTTTTTATCACTTTTAACGCATGGCTGGGATGTGCACTGCTTGTTGTGGCTGCGTCTGCTTCAAGATCTTTCTATAGAACTAGGTTAAGGTGGTTAATCTGA 381 0.3937 MSLDVKKTAFDGHEKMLLSQEQQAKIIEVRRLIGPLSDKASVYCSDASISRYLRTKNWNVKKAAQMLKQSLKWREEYKPEEICWVSYCLSSPFLFITFNAWLGCALLVVAASASRSFYRTRLRWLI. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02775 126 Gene3D - 3 94 IPR036865 -
Seca4g02775 126 PANTHER GH16843P 18 84 - -
Seca4g02775 126 Pfam CRAL/TRIO, N-terminal domain 25 68 IPR011074 -
Seca4g02775 126 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Seca4g02775 126 SUPERFAMILY CRAL/TRIO N-terminal domain 18 84 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02775 Seca-Chr4 47810873 47812320 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02775 K26544 - gmx:100775995 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02034 8 43418826 43421197 Seca4g02775 4 47810873 47812320 PCT