Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01292 ATGTGGAGTAGATGGTGGTGTGGTGGTGGCGGTGTTGGGTTGTTGAGGCAAAGGGTATCTTCTGTTTTCAATGGAAGTCATTGTTATGGGGGAAAGCTTCGACCTTTTGATCCTCTTTTGTGGGGTTTGAGGGATTTTGCAGTGGGATGTGGTGGAGGAAGGAGGGGAGGGGTGGCATCTTTATCAGTTTTTGTGATGAACCAGATGAAGAGGGGTGTGTCTTCATCAACTTTGGTTTCCTCACCTGCTGCTACTGGTGGTAACTCCGATTCATCTGGCAATGATAATGGAAAAAAAGACTCTATATCTTTCTCTGAAGCTAAGAAGCTTATGAGATTGGTGAATGTGGAATCACTCAAGGTGAAAATTGGTATGGATGGGAAGGAAGTTATTCCCTATGATGAGCTTCTTGAAGCTTGTGAGAGCATGGGTGTTGCCAGGAATTCTGAGGAGGCTTCAGCATTCGCCAAGGTTCTGGATGAAGCTGGGGTTATCCTCCTCTTCAGGGACAAGGTCTATCTGCATCCTGATAAGGTGGTGGAACTGGTTAGAAGGGCAGTTCCATTGGCACTGACTGCTGAGGATGATCCTGTGAGGGAGGAGTTAAAGAAGCTGCAAAAGAAGAAAGAAGAGATTGATGTGTTGGCACATAAGCAGGTGCGGCGCATCCTGTGGTCTGGACTAGGCTTTGGTATAATTACTGTTGGGTTCTTCTTCAGGCTAACATTCTGGGAATTCTCATGGGATGTAATGGAACCTATTGCATTTTTTACAACTTCCACTGGCTTAGTAATAGGCTATGCATACTTTTTATTCACTTCAAGGGACCCTACTTACCAAGACTTCATGAAGAGGCTCTTTCTTTCAAGGCAGAGGAAGCTTCATAAGAGGTATAGTTTTGATGTTGAAAGATTCAAGGAGCTTCAGTGCAAGTGTAAAACACCTTTAGATGCCAAAACCATTTTAAAAAATCGCACAGGGGTGGATCTGGACTTGGAGGATGCTTTACACAGGGATTAA 1020 0.4451 MWSRWWCGGGGVGLLRQRVSSVFNGSHCYGGKLRPFDPLLWGLRDFAVGCGGGRRGGVASLSVFVMNQMKRGVSSSTLVSSPAATGGNSDSSGNDNGKKDSISFSEAKKLMRLVNVESLKVKIGMDGKEVIPYDELLEACESMGVARNSEEASAFAKVLDEAGVILLFRDKVYLHPDKVVELVRRAVPLALTAEDDPVREELKKLQKKKEEIDVLAHKQVRRILWSGLGFGIITVGFFFRLTFWEFSWDVMEPIAFFTTSTGLVIGYAYFLFTSRDPTYQDFMKRLFLSRQRKLHKRYSFDVERFKELQCKCKTPLDAKTILKNRTGVDLDLEDALHRD. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01292 339 MobiDBLite consensus disorder prediction 76 99 - -
Seca8g01292 339 Coils Coil 198 218 - -
Seca8g01292 339 Pfam Mitochondrial calcium uniporter 150 308 IPR006769 -
Seca8g01292 339 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 86 313 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01292 Seca-Chr8 20028167 20031451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01292 K20858 - gmx:100803689 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01292 8 20028167 20031451 Seca8g01292 8 20028167 20031451 ECH
Seca8g01292 8 20028167 20031451 Seca6g02462 6 87334520 87338652 PCT