Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02462 ATGTGGGGTAGGTGGTGGTGTGCTGGTGGTGGTTTGGGCTCTTTGAGGCAAAGGGTATCTGCAATTGTTAATGTCCACCATGTTTATAAGAAAAAGCTTCATCCTTTTGATCCTCCTTTGTTGGGTTTGAGGGGTGTTGTTGCATTGATGTGTGGTGAAAGGGGAGGAGGTACAGCATCTTTATCATTCATGCTGAACCAGGTGAAGAGGGGTATATCATCTTCCACTGTGGTTTCCAACTCCTATGGTGATGGTGGTCCCAGCATTGATAAGGGAAAAGAAGATTCCATATCATTCTCGGAAGCAAAAAAGCTTATGAGATTGGTGAATGTGGAAACGCTCAAGATGAGGCTTGGTATAGAAGGGAAGGAAGTTATATCCTACTATGAGCTTCTTCAAGCCTGTGAGAGCACAGGTATTGCCAGGAATCAGGAGGAGGCTGCAGCATTTGCTAGGGTTCTTGATGAGGCTGGGGTTGTTCTCCTCTTCCGGGACAAGGTGTATCTACATCCTGATAAGGTGGTGGATCTGATTCGAAGAGCCGTTCCACTGGCACTGACTTCTGAGAATGATCCTATGAGGGAGGAGTTAAAGAAACTACAAGAGAAGAAAGAGGAAATTGATGTGTTGGCACATAAGCAGGTGCGGCGCATCCTCTGGTCTGGACTAGGATTCGGTGTAATTACCGTCGGGTTCTTCTTTCGGCTAACATTCTGGGAATTTTCATGGGATGTGATGGAACCTATTGCATTTTTCACCACAACCACTGGGTTAGTCATAGGCTATGCCTACTTTTTATTCACTTCAAGAGACCCTACTTACCAAGATTTCATGAAGAGGCTCTTCCTTTCAAGGCAGAGGAAGCTTTTTAAGAGCAATAATTTTGACATTGAGAGATTCAAGGAGCTCCAGTGCAAGTGCAAAACACCTTTACATGCTAGTACTGTTTTAAAAAATCGCATAGGAGTGGAACTGGATCTTGAAGATGCTTTACATAGAGATTAG 1005 0.4428 MWGRWWCAGGGLGSLRQRVSAIVNVHHVYKKKLHPFDPPLLGLRGVVALMCGERGGGTASLSFMLNQVKRGISSSTVVSNSYGDGGPSIDKGKEDSISFSEAKKLMRLVNVETLKMRLGIEGKEVISYYELLQACESTGIARNQEEAAAFARVLDEAGVVLLFRDKVYLHPDKVVDLIRRAVPLALTSENDPMREELKKLQEKKEEIDVLAHKQVRRILWSGLGFGVITVGFFFRLTFWEFSWDVMEPIAFFTTTTGLVIGYAYFLFTSRDPTYQDFMKRLFLSRQRKLFKSNNFDIERFKELQCKCKTPLHASTVLKNRIGVELDLEDALHRD. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02462 334 Coils Coil 193 213 - -
Seca6g02462 334 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 81 308 IPR039055 GO:0051560
Seca6g02462 334 Pfam Mitochondrial calcium uniporter 145 303 IPR006769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02462 Seca-Chr6 87334520 87338652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02462 K20858 - gmx:100784357 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02462 6 87334520 87338652 Seca6g02462 6 87334520 87338652 ECH
Seca8g01292 8 20028167 20031451 Seca6g02462 6 87334520 87338652 PCT