Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01267 ATGGGTACATGTTTGAGCACAAAGAAAGGCTCCTCTACCCCCTCCTCTGTTTCTGGACCCAAGCCAGTTTCAACTGCTCCTACTCAGCAAAAGGATTCTGGGAATGGTGTCCCAATCACACTATCTAACAAACCAGAAGTGAGCTTGAAGAATAAGAAGTCACTGCAAGAGAAACAAGACCCAGATTTAGTGAAAGAAGATGAAGGTCAAGTGAAAAAGGAGATATTCATCATCAAACACAGGAAGAGCCATGATGATAGAGAAAGAAGCTCCAAAATCTCACCTTGCGCTGCTCAGCAGAATGTGCAAGCACAATCAGCTGATGGGTTGGCTTCATCTGCTGCTACCAGTGAAGCAGCTGAATCTGAATCAATGAGCAACAAGATTGCACCACCTACACCAAACATGGGTGTGATGGGTGTGAGGACTTCAAGCTGTACCAAAGAAGAGGTAGATGCAATTCTCATTCAGTGTGGAAGACTCAGTAGAAGCTCTTCTGGAAAAGCTGCTTCTTCTGCTGGGAGAAAGTACTCAGGTTCCAAGAGAAGTTATGATTTTGATCATTGTGACAATGATACAATTTCTGCTGAAGATGACCCAAAGAGGGCTAATGCAAGTGACAACAGTGAGGAATATGATGGGGTGGCTGCAGAGAATCGCTACCACCAACACCGCCCAAGGCACCGCCAATCACCAAGAAAACCCTCTTCTTCTTCTTCTCAAGGAAGAAGAAGGACCCCAAGTAGGGAAAGAGACCAGCAGAACCAACGTTCAAGCAGCAGAGAAAGGAGAGTGAGTAGATCTCCTGGTAGAAGATCATCTGAAACCACTACATCCAATGCCAATGCAAGCAACAACAACACAACTTCTAGGCCTGGGAAAATGGTGTCTGTTCCTGCCACTGTTTCATCACTTGTTATGGATAAGAGTAACAATGGTGGTGGTGGAGAGACTGCAGCAGCCACAGGCATCAAGAGGATCACTGTTAAGAGAAATGTTGGTGATTGTGGGATGGCCGGTTCAAGGAGTGCAGCATCACCACGTTCTCAATCCCCTGCTAGAGCAAATGGGAATGCACCAAATGCTAAACTTTTGTGTGAGAATCAGCAGCAGCAACCTTCACTTAGCCGCAACAACTCTTCAAGGAAAACAGAACATTCTCCTTACAGAAGAAACCCACTGAGTGAGGTTGATCCTAACTCCCTTGCTTATCCACAATCAAACAGTACTAACAATAGCAGCAGCAAGGTGCAAAACAAACCCAAGAAGGAGATTGAAGCAGAAACCAATCAGAAACCAAATATTGATGTCAATGACAACAACAGAAACAGGACCAGTGGCAGAGTTGCATTGGAGAAGGGTGTTGTGGGTGTAAATTACAAGACAAAGGAGATACAAGAGGAAGAGATCAAGGTGCTATCTTCAGTTCCTGATAATGCTGTTGTGAAGACAATGGTGGTGCCATCAGGGGTTGACAATCTCAAACCCCAGACATTAACAAGAAGCAGATCTTCTAGAAGATCCAGAGACTTAGACATCAATCCTGAAGCTTTGTTGAATCCTGCACAACAATCCTATACCTCTCTATTGCTTGAAGACATCCAGAATTTCCATCAAAAGAACACACAACAACCTTCTGTTTCTCTCCCAGCTTGTCTCACCAAAGCATGCTCTATCCTTGAAGCTGTTGCTGATCTGAACTCCACCACCAGTTCAAATTTCTCTGGTGCATTCTCTGAGGACAAGAGAAGTCCACCCACTTGCCAATCTATTAGAAATGAGTACAATGTTCCATTGAGTGCCAATCATTATGGGAAGAGAGGGCATGATGGCAAGGAACCATTTATAGAATCTGAGGTAGTTGTCAGTGTTGATGTGATGGAACCAAGCTTACACAAGTATGTGACAGTGAAGAGAGGTGGTTCACTTGGTGGGGTAGACATGGAGGATCAAGAGTCTTCAGGAAGCAACAGCTTCACTGTGAGTAGTGGTCAACAACACTGGGGCATTTCTTCTTCTTCATGGGAACCTAATTCTGCTGACTCAGCAGATTGTTGGACTTCAAGATTGAACAGCAGAGAGGAGGGTCAGAGAAATCCCTTAGGCTTGGATGGTAATTTGTCATCTGAAACAGGGAAGAAGACAACAACAACAACATTGAACAGCAAAAGGAGAGAGTGTGATCATCAGCACAGCAGTGGAATAGGGCGTGGAAGGCTTGGTTCCAACAAGGGTCTTCATTCATTACCGGTTGTCACAGCTACTGCATCAACATAG 2277 0.4475 MGTCLSTKKGSSTPSSVSGPKPVSTAPTQQKDSGNGVPITLSNKPEVSLKNKKSLQEKQDPDLVKEDEGQVKKEIFIIKHRKSHDDRERSSKISPCAAQQNVQAQSADGLASSAATSEAAESESMSNKIAPPTPNMGVMGVRTSSCTKEEVDAILIQCGRLSRSSSGKAASSAGRKYSGSKRSYDFDHCDNDTISAEDDPKRANASDNSEEYDGVAAENRYHQHRPRHRQSPRKPSSSSSQGRRRTPSRERDQQNQRSSSRERRVSRSPGRRSSETTTSNANASNNNTTSRPGKMVSVPATVSSLVMDKSNNGGGGETAAATGIKRITVKRNVGDCGMAGSRSAASPRSQSPARANGNAPNAKLLCENQQQQPSLSRNNSSRKTEHSPYRRNPLSEVDPNSLAYPQSNSTNNSSSKVQNKPKKEIEAETNQKPNIDVNDNNRNRTSGRVALEKGVVGVNYKTKEIQEEEIKVLSSVPDNAVVKTMVVPSGVDNLKPQTLTRSRSSRRSRDLDINPEALLNPAQQSYTSLLLEDIQNFHQKNTQQPSVSLPACLTKACSILEAVADLNSTTSSNFSGAFSEDKRSPPTCQSIRNEYNVPLSANHYGKRGHDGKEPFIESEVVVSVDVMEPSLHKYVTVKRGGSLGGVDMEDQESSGSNSFTVSSGQQHWGISSSSWEPNSADSADCWTSRLNSREEGQRNPLGLDGNLSSETGKKTTTTTLNSKRRECDHQHSSGIGRGRLGSNKGLHSLPVVTATAST. 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01267 758 MobiDBLite consensus disorder prediction 1 143 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 431 447 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 399 418 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 1 49 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 702 718 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 93 131 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 640 758 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 244 270 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 180 221 - -
Seca8g01267 758 PANTHER OS02G0734667 PROTEIN 1 756 IPR040412 -
Seca8g01267 758 MobiDBLite consensus disorder prediction 719 733 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 50 92 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 157 448 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 159 178 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 649 695 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 343 382 - -
Seca8g01267 758 MobiDBLite consensus disorder prediction 271 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01267 Seca-Chr8 19732382 19735324 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01267 - - pcin:129301863 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01267 8 19732382 19735324 Seca8g01267 8 19732382 19735324 ECH
Seca8g01267 8 19732382 19735324 Seca6g02453 6 87222666 87225401 PCT