Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02453 ATGGGTACATGTTTGAGCAAAAAGAAAGGTTCTTCTACCTCCTCCAATCTTGCTGGAACCAGGCCAGCTACCACAGCACCTACAGTGCCTGAGCTGAAAAATTCTTCAGGGAATAGTGTCACTGTGTCCAAACCCAAAGTGGAAACTGAGCCAGAAGTGAAACTGAAGAAGGAGAATAAGAAAGTGCAAGAGAAACATGAGTCAGTACAAGAAGATAAAGGCCAAGTGAAAAAGGAGATATTCGTCATCAAGCACAGGAAGAGCCATGATGATAGGGATAGAAATTCCAAGTGCCCACTTGACATTGCTCAGCAGAATGCACCACAACAAGCTTCTACCATTGAAGCAGCTGAATTAATGGGTGAAAAGACTACTTCCCCACCAGCAGCAAACATGGGTGTGTGTGTTAGGACTTCGAGCTGTACAAAAGAAGAAGTGGATGCAATTCTTATACAGTGTGGGAGACTCAGCAGAAATTCTTCAGGTAAAGCTGCTGCTTTTAGGGAACGTGGGAGAAAGTACTCAGGTTCAAAGAGAAGTTTTGATTTTGATCACTGTGATAATGACACCATTTCCACTGAGGATGACCAAAAGAAAGTCAATTCCAATGGCAACAACAGTGATTTGTTTGAGGATGATGGTATGGCAGCTGCAGAGAAACGGCACCGCCAGTCTTCAAGGTCTTCTTCTCAGGAAAGAAGAAGAAGAACACCAAGCAGGGAAAGGGAGCAGCATCAACGTTCCAGTAGCAGAGAGAGGAGAGTTAGTAGATCTCCTGGAAGAAGATCATCAGAGACCACCACACTTCACAATGCAAGAAACAACAGCAATACCAGTTCTAGGCCTGGAAAGATGGTCACTGTCCCTGCTACTGTTTCATCCCTAGTGATGGATAAGAGTAACAATGGTGGTGGAGAATGTGCAGCAACCACAGGCATCAAGAGGATCACGGTTAAGAGAAATGCTGGTGCACCCTCTCCACGTTCTCAATCCCCTGCAAGAGCAAATGGGAATGCAGCAAATGCTAATAATAAAGTATTGAGTGAGAATCAGCAGCAGCCATCCCTTAGCCGCAACTCTTCAAGGAAAGCAGAACAATCACCTTACAGAAGAAACCCACTGAGTGAGGTTGAGCCTAACTCTCTTGCTGTTCCAAATTCAACAGCCAACAATAACAGCAGCAGGGTGCAAAATAGACCCAAAAAGGAAATTGAAACAGAAGCTAATCAGAAACCAAATGCCAACAAAATTGCATTGGACAGTGTAAATTGCAAAACAAAAGTGAAACAAGAGGAAGATGTCAAAGTTCAGTCTTCAATGACTGATAATGTTGTTGTGAAGACAGTGGTACTACCAGAGGTTGACAACCTAAAACCCCAGACATTAACAAGAAGCAGATCTTCTAGGAGATCTCGAGATTTAGACATTAATCCTGAAACCTTGTTGATTCCTCCACAGTCCTACACCTCACTACTGCTTGAAGATATCCAGAATTTCCATCAAAAGAATACACCACCCGTTTCTCTCCCAGCTTGTGTCACCAAAGCTTGCTCTATCCTTGAAGCTGTTGCTGATCTCAACTCCAATAGCATCTCAAACTTCTCTGGTGCAGAAGACAGGTCATGTCCACCCGGTTTTCAGTCTAGTAGGAATGAATACAATGTTCCATTGGGTACTACCAATAACTATAGGAAGTGGGTGTCAGATACCAAGGATCCAATTGTAGAATCTGAGTTAGTTGTTAATGATGATTTGATGCAACCCAGCTTACACAAATATGTGACAGTGAATAGGGGTGGTTCACTTGATGGGGTAGACATAGAGGATCAAGAGTCTTCAGGAAGCAACAGTTTCACTGTCAGTAGTGGTCAACAGCAATGGGGCATTTCTTCTTCTTCTTCATGGGAACCCAGTTCTGGTGATTCAAAAGATTGCTGGACTTCAAGATTGAACAAATCCAGAGAGGAGGGTCAGAAAAGCCTATTAGGCTTGGAAGGGAGGGTATCATCTGAAACAGGGCGTGATGTGGATGGGGCTAGGAAGAAATTGAACAGCAGAAGGGGAAAGTGTGATGGCAGTGGGGTAGGGCATGGTAAGCTTGGTGCCAATAAAGTTCTTCACACGGTACCTGTTGTCACAGCTGCTGCATCCACATAA 2157 0.44 MGTCLSKKKGSSTSSNLAGTRPATTAPTVPELKNSSGNSVTVSKPKVETEPEVKLKKENKKVQEKHESVQEDKGQVKKEIFVIKHRKSHDDRDRNSKCPLDIAQQNAPQQASTIEAAELMGEKTTSPPAANMGVCVRTSSCTKEEVDAILIQCGRLSRNSSGKAAAFRERGRKYSGSKRSFDFDHCDNDTISTEDDQKKVNSNGNNSDLFEDDGMAAAEKRHRQSSRSSSQERRRRTPSREREQHQRSSSRERRVSRSPGRRSSETTTLHNARNNSNTSSRPGKMVTVPATVSSLVMDKSNNGGGECAATTGIKRITVKRNAGAPSPRSQSPARANGNAANANNKVLSENQQQPSLSRNSSRKAEQSPYRRNPLSEVEPNSLAVPNSTANNNSSRVQNRPKKEIETEANQKPNANKIALDSVNCKTKVKQEEDVKVQSSMTDNVVVKTVVLPEVDNLKPQTLTRSRSSRRSRDLDINPETLLIPPQSYTSLLLEDIQNFHQKNTPPVSLPACVTKACSILEAVADLNSNSISNFSGAEDRSCPPGFQSSRNEYNVPLGTTNNYRKWVSDTKDPIVESELVVNDDLMQPSLHKYVTVNRGGSLDGVDIEDQESSGSNSFTVSSGQQQWGISSSSSWEPSSGDSKDCWTSRLNKSREEGQKSLLGLEGRVSSETGRDVDGARKKLNSRRGKCDGSGVGHGKLGANKVLHTVPVVTAAAST. 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02453 718 Coils Coil 52 79 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 1 111 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 318 410 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 535 554 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 159 285 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 604 697 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 379 397 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 165 196 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 647 661 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 323 368 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 261 285 - -
Seca6g02453 718 PANTHER OS02G0734667 PROTEIN 1 716 IPR040412 -
Seca6g02453 718 MobiDBLite consensus disorder prediction 670 688 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 47 98 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 1 45 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 213 260 - -
Seca6g02453 718 MobiDBLite consensus disorder prediction 608 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02453 Seca-Chr6 87222666 87225401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02453 - - gmx:102667523 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02453 6 87222666 87225401 Seca6g02453 6 87222666 87225401 ECH
Seca8g01267 8 19732382 19735324 Seca6g02453 6 87222666 87225401 PCT