Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01266 ATGGCAGATCATCAGAAAATCCATCCTGTTCATGATGTTGAATCACCACAGCAACCTTCAGCTCCTTTGGTTCCAAGGAACATGTCAAAATCTGATAGTGGTGATCCAGAGAATGTAGAGCATCACCCTTCTATTCCTCCTTCTCAACAAAACACCTTACCTTTGATGAATCCTAAGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAAGTTCCTGTGTTGGATAATAAGCATATTGTTGATTCTGATTGTAGCTATTGGCATCACTATTGGGATACTATTCCTTGTGTTTAGACCAAAGCTTCCAAAATACTCAGTGGATGAACTCAGAGTTACTCAATTTGATCTTTCTGACAACAATAGCCTATCTGTTACTTTCAACTTGACAATCACTGCCAGAAATCCAAACAAGAAGATTGGAATTGACTATAGAGGTGGGAGCCATATAAGTGCTTGGTATAATGACACAAAATTATGTCAAGGGTCTTTGCCTAAATTCTACCAAGGTCACAGAAACATCACAGTGCTTAGTATACCTTTGACAGGACAAACACAAGATGCAACAGGGCTAAGAAATTCCCTGCAGCAACAGTTGCAAGTAACTGGTAATGTTCCCCTTAATCTGAAGGTGAAACAGCCTGTGAGGATTAAGCTTGGGAAGTTGAAGCTGTTCAAAATCAATTTCAGGGTTAGGTGCAGGATAGTGGTGGATAATCTAAGTGCTAATAATTCTATTAGAATTAGGAGCAGTAGTTGTAAGTTCAGGTTTAGGCTATGA 777 0.3964 MADHQKIHPVHDVESPQQPSAPLVPRNMSKSDSGDPENVEHHPSIPPSQQNTLPLMNPKPPKKRRSCCCKFLCWIISILLILIVAIGITIGILFLVFRPKLPKYSVDELRVTQFDLSDNNSLSVTFNLTITARNPNKKIGIDYRGGSHISAWYNDTKLCQGSLPKFYQGHRNITVLSIPLTGQTQDATGLRNSLQQQLQVTGNVPLNLKVKQPVRIKLGKLKLFKINFRVRCRIVVDNLSANNSIRIRSSSCKFRFRL. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01266 258 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 26 240 - -
Seca8g01266 258 Pfam Late embryogenesis abundant protein 129 232 IPR004864 -
Seca8g01266 258 Gene3D - 96 240 - -
Seca8g01266 258 MobiDBLite consensus disorder prediction 1 59 - -
Seca8g01266 258 SUPERFAMILY LEA14-like 81 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01266 Seca-Chr8 19710696 19711472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01266 62 246 EF-hand Containing Proteins AT5G21130 32.447 3.19e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01266 - - gmx:100782663 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01266 8 19710696 19711472 Seca8g01266 8 19710696 19711472 ECH
Seca8g01266 8 19710696 19711472 Seca6g02451 6 87207498 87208241 PCT