Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02451 ATGTCAGATCATCAGAGAATTCACCCTGCTCATGATGTTGAGGCACCAAACAGACCAACAGTTCCTTTGTTTCCTAGGAACATTGCAAAATCTGATCATCATCATCAACCTCTTCCTAAGCGTGGCTTTCCAGTGAGACATTCCATGCCACCAAAGAAAAGAAGTTGCTGCTGCAGGTTCTTTTGTTGGACATTAAGCATATTGTTGATTCTTATAATTGCTATTGCCATCACTATTGGGATACTTTTCCTTGCTTTTAGGCCAAAGCTTCCCAAATACTCAGTTGACAAATTGGGAATAAGCCAATTCAATTTTTCTGATAACAATAGCCTCTTTGTTACCTTCAATGTGACAATTACTGCTAGAAATCCAAACAAGAAGATTGGAATATACTATGAAGGTGGAAGTCATATAAGTGCTTGGTATAAGGACACACAACTATGTGAAGGGTCTTTGCCAAAATTCTACCAGGGTCATAGAAACACCACAGTGCTTAATCTGCCTCTAACAGGTCAAACACATGATGCAACTGGCCTACAAAATACACTGGAGCAGCAGCTTCAAGAGACAAGTAATATCCCCCTTAATCTTAAGGTCAATCAGCCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTCAAGTTCAGGGTTAGGTGCAGGCTTGTGGTGGATAGTCTTGGTGCTAATAATGATATTAGAATTTCAAACAGTAGATGTAAGTTTAGGCTTAGGCTATGA 744 0.3978 MSDHQRIHPAHDVEAPNRPTVPLFPRNIAKSDHHHQPLPKRGFPVRHSMPPKKRSCCCRFFCWTLSILLILIIAIAITIGILFLAFRPKLPKYSVDKLGISQFNFSDNNSLFVTFNVTITARNPNKKIGIYYEGGSHISAWYKDTQLCEGSLPKFYQGHRNTTVLNLPLTGQTHDATGLQNTLEQQLQETSNIPLNLKVNQPVRVKLGKLKLFKVKFRVRCRLVVDSLGANNDIRISNSRCKFRLRL. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02451 247 Pfam Late embryogenesis abundant protein 118 222 IPR004864 -
Seca6g02451 247 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 20 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02451 Seca-Chr6 87207498 87208241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02451 54 247 EF-hand Containing Proteins AT5G21130 27.919 7.12e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02451 - - gmx:100781699 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02451 6 87207498 87208241 Seca6g02451 6 87207498 87208241 ECH
Seca8g01266 8 19710696 19711472 Seca6g02451 6 87207498 87208241 PCT