Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00983 ATGGAGTCTTTATGCAACAAGGGTGAAAATTTTCAAAAGAAAAGAGATGGGTTACGGTCTCCTTGTTCTGCTGTTAAAGTGGCTAAGAACAAGTCCTTAAACGGTTCTTGTGTGGAGTCTAGAGAAACCAGTTCTAGTGGATCGTGCTCCTCTGATTCGACTGAAGAGGCAAAAGCAGCAAAAGGGCCTTCTTCTCCTTCTCCTCTTGGCTGGCCTATACGGAAGGCTACGGTCTCCAAATGCAGCAAATCAGATAACAAAGAAAATGAACCTATTTCTCACTTGGAAGATACAAAATTTACCACTATCAGTTCAAAATTGTCTGCAAAATTTATTGGATTAGGGATTGATATGATGAAGGAAAGGTTTGCAAAATTACTGCTTGGTGAAGATATGTCAGGATCTGGAAAAGGAGTCTGCACTGCATTGGCCATCTCAAATGCTATTACTAATCTGTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTCTTCCTTGTGAAAAGAAAGCAATGTGGCGGAGAGAGATGGATTGGCTTCTTTGTGTTAGTGATCACATTGTTGAGTTAATGCCTTCTTGGCAAACATTTCCAGATGGAAATAAGCTTGAGGTAATGACTTGCAGGCCAAGGTCAGATATTTTTATAAATCTTCCAGCACTGCGTAAACTTGACAACATGCTTCTTGAAATTTTAGACAGTTGCACAGCTACAGAGTTTTGGTATGTTGACCAAGGAATTGTAGCCTCAGATGCAGATGGATCAGCTTCTTTCCGCAAAAGAATACAGAGGCAAGAGGAGAAGTGGTGGCTCCCTGTACCTCGGGTTCCCCCTGCAGGTCTCAGTGAGAACTCAAGAAAGCAGTTGAATCACACACGAGAATGTGCAAACCAAATACTGAAAGCATCCATGGCCATCAATAGCACTGCTTTAGCTGAAATGGAGGTTCCTGAGTCATATTTGGAAGCCCTTCCTAAGAATGGAAGAGCTTGCCTTGGGGATTTGATTTACCGTTACATCACATCAGATCCATTCTCTACAGAATGTCTTCTTGATTGCCTAGACCTCTCCTCTGAGCATGTTGCACTAGAGATTGCTAACCGTGTTGAAGCCTCAATTTATGTATGGCGCAGAAGGGCTCATTCTAAACCCCCACCTAATCCTAACCGTTCAACTACAAAGTCATCTTGGGACATTGTCAAGGACTTCATGGCTGATGGAGAAAAGAGAGAATTGCTAGCAGAAAGAGCTGAAAATATTCTTCTTTCATTGAAGCAGAGATTCCCAGGTTTAACTCAAACTACCTTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCCATACTTGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGTATTGATGATTTGCTATATGTGGATGACTTGACTAAACATTCAGATAGGTTCCCATTGGTTCCAACAACAATTAATATGGTTTCTCAGCAAAAGGTTTCACATCCATTGACAGTGTCTGTCTCAGGCACTCCACAAAAAGGCAAACCTAGCTTTTCACCTGTGCCACTAATTAGTCCTGCAAGGGGAGACAGAACTCCTTTCCTCAGCAACAATAACAACAACATCATCAAACCTCAACGTCGTGGCTTTGGTGTGAGGAGGGTATTGTCAAATTATCTTGGAGTAGAGACAAAAGCAACAAAGGTTGTTAACAATTCAACTGAGGTGAATTGTTCAAACCCAAGTAGCCAAAAAACAGAACAGCCAGAACGTCAGAAGGAATCATGTGTCATGAAAAGCAAGACAAAATGA 1821 0.4174 MESLCNKGENFQKKRDGLRSPCSAVKVAKNKSLNGSCVESRETSSSGSCSSDSTEEAKAAKGPSSPSPLGWPIRKATVSKCSKSDNKENEPISHLEDTKFTTISSKLSAKFIGLGIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWRREMDWLLCVSDHIVELMPSWQTFPDGNKLEVMTCRPRSDIFINLPALRKLDNMLLEILDSCTATEFWYVDQGIVASDADGSASFRKRIQRQEEKWWLPVPRVPPAGLSENSRKQLNHTRECANQILKASMAINSTALAEMEVPESYLEALPKNGRACLGDLIYRYITSDPFSTECLLDCLDLSSEHVALEIANRVEASIYVWRRRAHSKPPPNPNRSTTKSSWDIVKDFMADGEKRELLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPTTINMVSQQKVSHPLTVSVSGTPQKGKPSFSPVPLISPARGDRTPFLSNNNNNIIKPQRRGFGVRRVLSNYLGVETKATKVVNNSTEVNCSNPSSQKTEQPERQKESCVMKSKTK. 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00983 606 MobiDBLite consensus disorder prediction 590 606 - -
Seca8g00983 606 MobiDBLite consensus disorder prediction 509 543 - -
Seca8g00983 606 ProSiteProfiles PRONE domain profile. 106 488 IPR005512 GO:0005085
Seca8g00983 606 MobiDBLite consensus disorder prediction 576 606 - -
Seca8g00983 606 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 36 538 IPR038937 GO:0005085
Seca8g00983 606 FunFam Rop guanine nucleotide exchange factor 1 109 347 - -
Seca8g00983 606 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 482 IPR005512 GO:0005085
Seca8g00983 606 Gene3D PRONE domain, subdomain 1 346 487 - -
Seca8g00983 606 Gene3D PRONE domain, subdomain 1 113 345 - -
Seca8g00983 606 MobiDBLite consensus disorder prediction 27 60 - -
Seca8g00983 606 FunFam Rop guanine nucleotide exchange factor 14 348 487 - -
Seca8g00983 606 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00983 Seca-Chr8 13528723 13532704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00983 - - gmx:100782311 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00983 8 13528723 13532704 Seca8g00983 8 13528723 13532704 ECH
Seca8g00983 8 13528723 13532704 Seca6g02189 6 82588354 82592166 ECH
Seca8g00983 8 13528723 13532704 Seca6g02189 6 82588354 82592166 PCT