Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00972 ATGCTATATTGCTATGCCCCCTTCTTTCTTATTCCAGGTAGAAAAGCATATTCCCTCACATGGGCTCTGCAGTATATCAATCTTTTCATGATAAATGCTGGCTACATCATTTTGGCTGGTTCGGCTTTAAAGATCTTCTGCTTTAAGAATTTTTCTGAATCTTGTATGTTCATTGTCATGCAGGCCGTTTATGTTCTATTTAGGGATGATGATCAGATGAAGCTTCCATATTGTATTGCCATAGCTGGATTTGTTTGTGCTATGTTTGCCATATGTATTCCTCATCTTTCAGCTCTTGGAATTTGGCTGGGATTTTCAACAGTCTTCAGCCTAGTATATATTGTTATAGCATTTGTACTGTCACTTAAAGATGGAATAAAGTCACCAGCTCGAGATTATAATATTCCAGGGACATCAACATGTAGAATATTTACAACAATTGGGGCGTCTGCTAATCTTGTGTTTGCATATAATACAGGAATGCTTCCTGAGATACAGGCAACTATCAGGCAGCCAGTTGTCAAGAACATGATGAAAGCACTATACTTTCAGTTTACTGTTGGAGTTCTGCCATTATATCTGGTTACCTTTGCAGGATACTGGGCTTATGGATCTTCAACAGAAACCTATTTGCTGAATAATGTCAATGGTCCAGTCTGGATGAAGGCCATGGCCAATATTAGTGCCTTTCTTCAATCAGTCATAGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACCAAACATGGGATCAAGGGGAGTGCACTGGCTTTTAAGAACTTGTCATTTCGTGTCTTGGTGAGAGGTGGTTACCTGACTTTGAATACATTTGTATCAGCTCTATTGCCATTCCTTGGAGATTTCATGAGCCTCACTGGAGCTATCAGCACATTTCCTCTTACATTTATCCTTGCAAACCATATGTACCTAGTGGCAAATAAGAACAAACTAACATCCACTCAAAAGCTCTGGCATTGGATTAACATTTGGTTCTTTGGCATTATGTCTGTTGCAGCAACTATTGCAGCATTACGACTTATTGCTTTAGACTCCAAAACGTACCACTTCTTTGCGGATTTATAA 1092 0.3883 MLYCYAPFFLIPGRKAYSLTWALQYINLFMINAGYIILAGSALKIFCFKNFSESCMFIVMQAVYVLFRDDDQMKLPYCIAIAGFVCAMFAICIPHLSALGIWLGFSTVFSLVYIVIAFVLSLKDGIKSPARDYNIPGTSTCRIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVTFAGYWAYGSSTETYLLNNVNGPVWMKAMANISAFLQSVIALHIFASPMYEYLDTKHGIKGSALAFKNLSFRVLVRGGYLTLNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVANKNKLTSTQKLWHWINIWFFGIMSVAATIAALRLIALDSKTYHFFADL. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00972 363 Pfam Transmembrane amino acid transporter protein 13 346 IPR013057 -
Seca8g00972 363 PANTHER OS05G0424000 PROTEIN-RELATED 18 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00972 Seca-Chr8 13295242 13299256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00972 11 363 Organic Solute Cotransporters AT2G39890 70.822 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00972 K26247 - gmx:100816930 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00972 8 13295242 13299256 Seca8g00972 8 13295242 13299256 ECH
Seca8g00972 8 13295242 13299256 Seca6g02175 6 82159663 82163496 PCT