Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02175 ATGGGTAAAGGAGACGTTGAGCAATATGATTCAAACAAGGTCTATGACGAGGCTGCTGGTGACCCTGAAGTCCCTGCAACTGCACATCAAATTAGCAGCGATTCATGGTTTCAAGTGGCTTTTGTCCTCACCACCGGAATCAACAGTGCTTATGTGCTTGGATATTCCGGGACCGTCATGGTTCCCCTGGGTTGGATTGGGGGTGTAGTTGGTCTAATTCTAGCTACTGTAATATCACTCTATGCAAATGCTCTTGTTGCTATGCTCCATGAATATGGAGGGATAAGACACATTAGATATAGAGATCTTGCTGGATATATATATGGTAAGAAAGCATATAATCTCACATGGGCTTTGCAATATATCAATCTTTTCATGATTAATACTGGCTTCATCATTTTGGCTGGTTCAGCCTTGAAAGCTACTTATGTTCTATTTAGGGATGATGGTCAAATGAAGCTACCATATTGTATTGCCATAGGTGGATTTGTGTGTGCAATGTTTGCCATTTGTATTCCTCATCTTTCGGCTCTTGGAATATGGTTGGGATTTTCAACACTCTTCAGCCTAGCATATATGATTATAGCATTTGCCCTATCGCTTAAAGATGGACTAGAAACACCAGCTCGAGATTACAATATTCCAGGAGATGGTGTAAGTAAAATATTTACAACAATTGGGGCATCTGCTAATCTTGTATTCGCATATAATACTGGCATGCTTCCTGAGATACAGGCAACGATTAGGCAGCCAGTTGTCAAGAACATGATGAAAGCCTTGTACTTTCAGTTTACAGTTGGAGTTCTACCATTGTACCTTGTTGTATTTACAGGATACTGGGCTTATGGATCTTCCACATCAACCTATTTGATGAGTAGTGTGAATGGTCCAGTTTGGCTGAAAGCTGTGGCCAATATTTCAGCCTTTCTTCAATCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTATTTGGATACTAAATTTGGGGTCAAAGGAAGCGCATTAAATGTTAAGAACTTGACATTTCGAATCGGGTTAAGAGGTGGCTACCTGACCTTTAATACATTTGTGTCAGCTCTTCTCCCATTCCTTGGAGATTTTATGAGCCTCACTGGAGCGATCAGCACATTTCCACTTACATTTATTCTTGCAAACCATATGTACCTCGTGGCAAAGAAGAACAAACTAACAAGCTTACAAAAGCTCTGGCACTGGCTCAACATTAGTTTCTTTAGCATCATGTCTCTTGTAGCGACAATTGCAGCCATACGACTTATTGCTGTAGACTCCAAAACATACAATCTTTTTGCCGATTTGTGA 1329 0.4033 MGKGDVEQYDSNKVYDEAAGDPEVPATAHQISSDSWFQVAFVLTTGINSAYVLGYSGTVMVPLGWIGGVVGLILATVISLYANALVAMLHEYGGIRHIRYRDLAGYIYGKKAYNLTWALQYINLFMINTGFIILAGSALKATYVLFRDDGQMKLPYCIAIGGFVCAMFAICIPHLSALGIWLGFSTLFSLAYMIIAFALSLKDGLETPARDYNIPGDGVSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVVFTGYWAYGSSTSTYLMSSVNGPVWLKAVANISAFLQSVIALHIFASPMYEYLDTKFGVKGSALNVKNLTFRIGLRGGYLTFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLVAKKNKLTSLQKLWHWLNISFFSIMSLVATIAAIRLIAVDSKTYNLFADL. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02175 442 Pfam Transmembrane amino acid transporter protein 34 425 IPR013057 -
Seca6g02175 442 PANTHER OS05G0424000 PROTEIN-RELATED 31 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02175 Seca-Chr6 82159663 82163496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02175 60 442 Organic Solute Cotransporters AT2G39890 74.151 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02175 K26247 - gmx:100778997 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02175 6 82159663 82163496 Seca6g02175 6 82159663 82163496 ECH
Seca8g00972 8 13295242 13299256 Seca6g02175 6 82159663 82163496 PCT