Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00965 ATGAAGGGTTCGAGCCGTTTCTTCACGATCGGTTTGGTGTCGGCGTGGTACTCGTCGAACATTGGGGTGTTGTTATTGAACAAGTATCTTTTGAGCAACTATGGCTTCAAGTACCCGATTTTTCTCACCATGTGTCACATGACGGCGTGTTCCTTGTTCAGCTACGTCGCTATAGCGTGGTTGAAGATGGTACCCATGCAGACAATTCGTTCACGGCTTCAGTTTCTCAAGATCGCAGCGCTTAGCCTTGTTTTCTGTGTCTCCGTCGTCTTTGGTAACATCTCACTCCGTTATCTTCCCGTTTCTTTCAACCAGGCCATCGGTGCTACGACGCCGTTTTTCACCGCCGTCTTTGCTTACCTCATGACCTTCAAGAGGGAGGCTTGGCTCACCTATCTCGCCCTCGTTCCTGTTGTTACTGGGGTCATCATTGCCAGTGGGGGTGAACCAAGCTTCCATTTATTTGGTTTCATAATATGTATTGCGGCAACAGCTGCTCGAGCCCTAAAATCAGTGTTACAAGGAATTTTACTTTCTTCTGAAGGGGAGAAGCTAAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCAGTTGTTTTCCTTCTTCCTGCTACACTTCTAATGGAAGAAAATGTGGTTGGCATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCATATTTTGTCAACCTGACCAATTTTTTGGTCACGAAACATACCAGTGCTCTAACCCTTCAGGTATGCCTCACTTTCTTTAATCAAACGAACTATGTTTTTAATGAAATATAA 825 0.4448 MKGSSRFFTIGLVSAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKMVPMQTIRSRLQFLKIAALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLALVPVVTGVIIASGGEPSFHLFGFIICIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLLMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLTFFNQTNYVFNEI. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00965 274 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 148 - -
Seca8g00965 274 PANTHER SOLUTE CARRIER FAMILY 35 10 259 - -
Seca8g00965 274 Pfam Triose-phosphate Transporter family 12 260 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00965 Seca-Chr8 13189353 13193501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00965 1 259 Organic Solute Cotransporters AT3G11320 90.734 2.18e-175 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00965 - - gmx:100806704 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00965 8 13189353 13193501 Seca6g02173 6 82139315 82142371 ECH
Seca8g00965 8 13189353 13193501 Seca8g00965 8 13189353 13193501 ECH
Seca8g00965 8 13189353 13193501 Seca6g02173 6 82139315 82142371 PCT