Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02173 ATGAAGGGTTCGAGCCGTTTCTTCACGATAGGGCTTGTGGCAGCATGGTATTCTTCCAACATTGGGGTGTTATTGCTGAACAAGTACTTGCTCAGTAACTATGGGTTCAAGTACCCGATCTTTCTGACCATGTGTCACATGACAGCGTGTTCTTTGCTTAGTTATGTTGCCATAGCGTGGATGAAGGTGGTGCCCTTGCAGACCATTCGATCCAGGGTCCAGTTCTTCAAGATCTCTGCTCTCAGCCTTGTCTTCTGTGTATCTGTTGTGTTTGGGAACATCTCACTTCGCTACCTCCCTGTTTCTTTCAACCAGGCAATTGGTGCCACCACGCCTTTCTTCACTGCCATTTTTGCTTACCTTATGACCTTCAAGAGGGAGGCTTGGCTCACTTATCTCACCCTTGTTCCTGTTGTTACTGGGGTCATCATTGCTAGCGGGAGTGAACCGAGTTTCCATTTATTTGGATTCTTAATATGTGTTGCGGCTACAGCTGCAAGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTAAATTCCATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCCACACTTATAATGGAAGACAATGTGGTTGGCATCACGTTGGCTCTAGCCAGAGATGATGTCAAGATCATTTGGTATCTTCTATTTAATTCGGCACTTGCGTATTTTGTCAACCTGACCAATTTTTTGGTTACGAAACATACCAGTGCTCTGACCCTTCAGGTAAGTCCCAATTATTCAAATTGGCTCGTGTCTCTGTTTGTTTTTCTAAATTTAATTTTCATTCCAACAAATTATCTGTTGTCTCATCAGTTGGTAGTTGGGCCATCAGATTTTGGTGGTTGTGAAATGAGTTTATCATCAAATATCACAAGATATGTATCACAGAATTGGCATGGTCTTGGTGACCTTGATTTTTCAACACTTCTTTTGCAATGTGCATTGGTGCAGTCATTTGTCTGTGGTTGTGGAATATCTTGTTCCCTGACTATTCCCTTTTTATTTGAGAATGAAATACTATGA 1074 0.4255 MKGSSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKVVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAIFAYLMTFKREAWLTYLTLVPVVTGVIIASGSEPSFHLFGFLICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEDNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVSPNYSNWLVSLFVFLNLIFIPTNYLLSHQLVVGPSDFGGCEMSLSSNITRYVSQNWHGLGDLDFSTLLLQCALVQSFVCGCGISCSLTIPFLFENEIL. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02173 357 Pfam Triose-phosphate Transporter family 12 261 IPR004853 -
Seca6g02173 357 PANTHER SOLUTE CARRIER FAMILY 35 10 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02173 Seca-Chr6 82139315 82142371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02173 1 275 Organic Solute Cotransporters AT3G11320 86.331 2.44e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02173 - - cave:132188116 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00965 8 13189353 13193501 Seca6g02173 6 82139315 82142371 ECH
Seca6g02173 6 82139315 82142371 Seca6g02173 6 82139315 82142371 ECH
Seca8g00965 8 13189353 13193501 Seca6g02173 6 82139315 82142371 PCT