Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00926 ATGGTTGATTTAGATTGGAAATCCAAGATGCTCAATTCAAACATGCCTCCAAAGTCCCCTAAACTCTCTCTATCTGATAAATCCATGCCCATCATAACCCATCCTTCCTTACCCACTTTGCAACTACCAAACGACATCTCCGCAGCGTCGTCTCCAGTTTGTACCGCGTACGACAACTACCTCCGCCTTCCTCAGCTCAGAAGCCTCTGGGCCTCCAACGACTTTCCTATTTGGCCCAACGAGCCCATCTTAAAGCCCGCCTTACAAGCTCTCGAAATCACGTTCCGTTTCCTCGCGACCGTTTTGTCAGACCCGAGACCATACGCGAATCATCGCGAGTGGGCCCGGCGGGTCGAGTCTCTCGCCATGGCCCAGGTCCATCTCATAGCCATGCTCTGCGAAGACGAGGAACAAGACCCCGAGACACGTGGCAAGGCACCGGTTAGTGACATAACCGAAATCAGCAAGAGCAGAAGCTACAGCGAGGGGAGCTTGCTTCCACGTCTTGCCACGTGGCATAAGTCAAAGGAAATAGCGCGGAGAATCCTTTCCACCGTGGAATGCGAGATGATGAGGTGTTCGTACACGCTGGGTTTGGGTGAACCAAATATAAACGGAAAGCCGGTTCTCCGTTACGACGCCGTTTGCAGGCCGAGCGAGATACACTCCTTAGAAACGACGCCGTATGACCACGTCGGGAACTACGAGAACCGTACGCTGCACGCGACGCATCAGATAGTGGAGTCGTGGGCACGCGCCTCGCGTGGGTTGCTGGAGAGGGTGGTAGAGTCGATAGAGAGCAGAAGGTTCGAGAAGGCGGCGAGTGAGTGTTACGCGGTGGAGAGGATCTGGAAGTTTCTAACAGAGGTGGAAGATTTGCACGTGATGATGGATCCGGAGGATTTTCTGAGGCTGAAGAAGCAATTAGGGATAAGGTCATGGGGTGAAACGGTGCCGTTTTGCTTCAGGTCGAAGGGGTTAGTGGAGATTACGAAGATGTGCAGGGATCTGAGGCATAAAGTGCCGGAGATTTTGGAGGTGGAAGTGGACCCCAAGGGTGGGCCCGGGATGATGGAAGCGGCGATGAAGGTGTACGCGGAGAAGAAGAGTGGGTTCGAAAGGGTTGAGGTGTTGCAGGCGATGCAGGGGATTGAGTCGGCGATGAAGAGATTCTTCTACGCGTACAAACAGGTGGTGGCGGTGCTGATGGGAAGCACTGAAGCAAATGCTGACTCGTTGACTCAAATATTCCTTGAACCAACGTATTTCCCTAGCTTGGATGCTGCCAAGACGTTTCTTGGGTATTATTGGGAACATAATGAAAATACAATTGCTTGGTAA 1341 0.5257 MVDLDWKSKMLNSNMPPKSPKLSLSDKSMPIITHPSLPTLQLPNDISAASSPVCTAYDNYLRLPQLRSLWASNDFPIWPNEPILKPALQALEITFRFLATVLSDPRPYANHREWARRVESLAMAQVHLIAMLCEDEEQDPETRGKAPVSDITEISKSRSYSEGSLLPRLATWHKSKEIARRILSTVECEMMRCSYTLGLGEPNINGKPVLRYDAVCRPSEIHSLETTPYDHVGNYENRTLHATHQIVESWARASRGLLERVVESIESRRFEKAASECYAVERIWKFLTEVEDLHVMMDPEDFLRLKKQLGIRSWGETVPFCFRSKGLVEITKMCRDLRHKVPEILEVEVDPKGGPGMMEAAMKVYAEKKSGFERVEVLQAMQGIESAMKRFFYAYKQVVAVLMGSTEANADSLTQIFLEPTYFPSLDAAKTFLGYYWEHNENTIAW. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00926 446 Gene3D - 210 320 - -
Seca8g00926 446 Pfam Hs1pro-1 N-terminus 1 187 IPR009869 GO:0006952
Seca8g00926 446 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 443 IPR038759 -
Seca8g00926 446 Pfam Hs1pro-1 protein C-terminus 190 439 IPR009743 -
Seca8g00926 446 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 212 433 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00926 Seca-Chr8 12527566 12528906 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00926 - - gmx:100778560 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00926 8 12527566 12528906 Seca8g00926 8 12527566 12528906 ECH
Seca8g00926 8 12527566 12528906 Seca6g02129 6 81432017 81433390 PCT