Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02129 ATGGTTGATTTACATTGGAAATCAAAGGTGCTAAGTTCCGACATGTCTTCCAAATCTCCAAAACTCTCTCTCCCCGACAAGTCCTCACCCCGAAGCTCCCTACCTTCTTTGCAACTACTACCTTTCATCGCCAACGATGTCTCCGCGGCGGCGCCTTCGCTATGCGCAGCTTACGACCACTATCTCCGCCTCCCGGAGCTCCGAAGGCTTTGGAACACAAGGGACTTCCCTAACTGGAGCAACGAACCGATTCTAAAACCTGCTTTACAAGCTCTCGAGATCACGTTCCGCTTCCTCTCCACCGTTTTCTCCGACACCAGACCTTACTCGAACCGCAGAGAGTGGAACCGCAGGGTAGAGTCCCTCGCCACGCGTCAGATCGAGATCATCGCCATGCTGTGCGAGGACGAGGAACAAGACCCCGAGACACGTGGCACTTCACCAATGGCTGATCTTAACGAAATCAATAGCAACAGCAGAAGCTACAGTGAGGCTAGTCTCCTCCCACGGCTTGCCACGTGGTACAGATCCAAGGACGTAGCGCAGAGGATTCTTCTCTCCGTGGAATGCCAAATGAGGAGGTGTCCGTACACGCTAGGTTTGGGCGAACCGAACCTCGCGGGAAAACCGAGCCTACGATACGACGCCGTGTGCAGGCCGAATGAGATTCACGCGCTGAAAACGACGCCGTACGACGACCGCGTGGAGAATTACGAGAACCACGCGGTGCACGCGTCGCACCAGATCGTGGAATCGTGGATCCACGCGTCGCGGAAGCTTCTGGAAAGGATAGGGAGCGCGATCGAGGGGAGGAGGTTCGAGAAGGCGGTGGAAGATTGTTACGCGGTGGAGAGGATCTGGAAGCTTCTAGCGGAGGTGGAGGACGTTCACTTGATGATGGATCCGGGCGATTTTCTGAAGCTGAAGAATCAGCTTTCGGTGAGGGGCGAAACGGCGTCGTTTTGCTTTAGGTCGAAGGAGCTTGTGGAGGTGACGAAGATGTGTAGGGATCTGAGACATAGGGTGCCGGAGATATTGGAGGTGAAGGTGGACCCGAAAGGTGGGCCCAGGATTCAAGAGGCGGCGATGAAACTGTACGTGGCGGAGAAGGTGAGTGGGTTCGAGAAGGTTCACTTGTTGCAGGCGATGCAGGGTATTGAGGTTGCGATGAAGAGGTTCTTCTATTCGTACAAGCAGGTTCTGGCGGTGGTGATGGGGAGCTCAGAGGCTAATGGAAACCGAGTTGGGTTGATGAGTTGCGACGGGGGTGACTCGTTAACTCACTTGTTCCTTGAGCCTACGTATTTTCCAAGCTTGGATGCCGCCAAGACTTTCCTTGGATACATTTGGGATAATGATAATAAATGGTTATGA 1374 0.54 MVDLHWKSKVLSSDMSSKSPKLSLPDKSSPRSSLPSLQLLPFIANDVSAAAPSLCAAYDHYLRLPELRRLWNTRDFPNWSNEPILKPALQALEITFRFLSTVFSDTRPYSNRREWNRRVESLATRQIEIIAMLCEDEEQDPETRGTSPMADLNEINSNSRSYSEASLLPRLATWYRSKDVAQRILLSVECQMRRCPYTLGLGEPNLAGKPSLRYDAVCRPNEIHALKTTPYDDRVENYENHAVHASHQIVESWIHASRKLLERIGSAIEGRRFEKAVEDCYAVERIWKLLAEVEDVHLMMDPGDFLKLKNQLSVRGETASFCFRSKELVEVTKMCRDLRHRVPEILEVKVDPKGGPRIQEAAMKLYVAEKVSGFEKVHLLQAMQGIEVAMKRFFYSYKQVLAVVMGSSEANGNRVGLMSCDGGDSLTHLFLEPTYFPSLDAAKTFLGYIWDNDNKWL. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02129 457 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 214 446 IPR037217 GO:0019441|GO:0020037|GO:0046872
Seca6g02129 457 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 455 IPR038759 -
Seca6g02129 457 Pfam Hs1pro-1 N-terminus 1 189 IPR009869 GO:0006952
Seca6g02129 457 Gene3D - 212 445 - -
Seca6g02129 457 Pfam Hs1pro-1 protein C-terminus 192 452 IPR009743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02129 Seca-Chr6 81432017 81433390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02129 - - psat:127083938 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02129 6 81432017 81433390 Seca6g02129 6 81432017 81433390 ECH
Seca8g00926 8 12527566 12528906 Seca6g02129 6 81432017 81433390 PCT