Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00924 ATGGTACCCCAGAAGCATGCTGAGGAAACCATGATGTCCAGCCTTAATGAGACGATTGAGCATGATGAAAGAGAGGAAGAGAAGGTAGATGGGTCAAGTTCTTCCTTGAAAAGCCTTCTCTGGCATGGTGGTTCTGTTTATGATGCCTGGTTTAGCTGTGCCTCAAATCAGGTTGCACAGGTTCTGTTAACACTGCCATACTCTTTCTCTCAGCTTGGAATGCTTTCAGGCATCATCTTCCAAATCTTCTATGGGGTGGTCGGAAGTTGGACAGCTTATTTGATTAGCATTCTATACATTGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGTTTACTAGGTCCATATTGGAAAGCCATTGGATTAGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAATGACCACTTGGACAAGCGGACTTGGACTTATATATTTGGAGCTTGCTGTGCCACAACAGTGTTCATACCCTCATTCCATAACTATAGGATTTGGTCATTCCTTGGCCTTGGCATGACTACGTACACAGCTTGGTACATGACCATTGCAGCACTTGTTCATGGCCAGGTTGAAAATGTGACTCACACGGGCCCAAAAAAATTGGTTTTGTATTTCACAGGCGCCACCAATATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCACAGAAGTTCAAATATATCTATCTTTTTGCTACTCTTTATGTGTTCACTCTTACCCTACCATCTGCTACTGCTGTCTATTGGGCCTTTGGTGACCAACTCTTGGACCATTCCAATGCCTTCTCTCTTCTTCCTCGCTCTGGTTGGCGTGATGCTGGTGTCATCTTAATGCTCATTCACCAGATCATTACCTTTGGATTTGCTTGTACACCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCTCTAGCTAGGTTGCCTGTGGTGATACCAATATGGTTTCTGGCTATTATTTTCCCTTTCTTTGGTCCCATTAACTCTGCTGTGGGGGCTCTATTGGTTAGCTTCACAGTCTATATCATCCCTGCTACTGCCCATATGCTTACATATAGGTCTGCTTCTGCAAGACAGAATGCTGCAGAGAAATTGCCCTTTTTCATCCCAAATTGGACTGCAATGTATGTGGTAAATGCATTTGTGGTGGTGTGGGTTATGGTGGTAGGATTTGGATTTGGAGGGTGGGCTAGCATGGCAAACTTCATCAAACAAGTTGACACATTTGGACTATTTGCTAAGTGTTACCAGTGCCCACCAAAAGTCCCAGCTTCCAACCACACCCTGCATAACTGA 1437 0.4384 MVPQKHAEETMMSSLNETIEHDEREEEKVDGSSSSLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQIFYGVVGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIAALVHGQVENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRSGWRDAGVILMLIHQIITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPATAHMLTYRSASARQNAAEKLPFFIPNWTAMYVVNAFVVVWVMVVGFGFGGWASMANFIKQVDTFGLFAKCYQCPPKVPASNHTLHN. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00924 478 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Seca8g00924 478 PANTHER OS05G0424000 PROTEIN-RELATED 48 435 - -
Seca8g00924 478 MobiDBLite consensus disorder prediction 1 31 - -
Seca8g00924 478 MobiDBLite consensus disorder prediction 15 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00924 Seca-Chr8 12432838 12438800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00924 4 465 Organic Solute Cotransporters AT2G21050 77.056 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00924 K13946 - gmx:100817572 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00924 8 12432838 12438800 Seca8g00924 8 12432838 12438800 ECH
Seca8g00924 8 12432838 12438800 Seca6g02126 6 81344934 81350040 ECH
Seca8g00924 8 12432838 12438800 Seca6g02126 6 81344934 81350040 PCT