Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02126 ATGTTACCCCAGAAGCAAGCTGAAGAAGCCATGGTGCCAAGCCTCAACCAGACGATTGAGCATGATGAGGGAGAGGAAGTGAAGGAGGATAACTCACATTTTAGCTTCAAAAGTTTTCTCTGGCATGGTGGGTCTGTCTATGATGCCTGGTTCAGTTGTGCCTCAAATCAGGTTGCCCAGGTTCTGTTAACTCTGCCTTACTCTTTCTCTCAGCTGGGAATGCTTTCAGGCATCATATTCCAAATCTTCTATGGTCTACTTGGTAGTTGGACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGTTGGAAGGCTTACTGGGTCCATACTGGAAAGCAATTGGATTAGCCTTCAACTGCACTTTTCTCCTATTTGGATCTGTTATCCAACTCATAGCTTGTGCAAGTAATATATACTACATAAATGACAACTTGGACAAGAGGACTTGGACCTACATTTTTGGAGCTTGCTGTGCCACCACAGTGTTCATACCCTCATTCCACAACTATAGGATTTGGTCCTTCCTTGGCCTTGGGATGACCACCTACACAGCATGGTATATGACTATTGCTGCCCTTGTTCATGGCCAGGTTGAAAATGTGACTCACTCGGGCCCAAACAAGTTGGTTTTGTATTTCACAGGCGCCACTAACATCCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAATTCAAATATATATATCTTTATGCTACTCTTTATGTGTTCACCCTCACACTACCATCTGCTACTGCTGTTTACTGGGCCTTCGGTGACCAACTTCTGGATCACTCCAATGCCTTCTCCCTCCTCCCACGTTCTGGCTGGCGTGACACTGCTGTCATCCTAATGCTCATTCACCAGTTCATCACATTTGGGTTTGCTTGTACGCCATTGTACTTTGTGTGGGAGAAAGTGATAGGGATGCATGACACAAAGAGCATTTGTTTGAGGGCTCTGGCCCGGTTACCTGTGGTCATACCCATATGGTTTTTGGCTATTATTTTTCCTTTCTTTGGGCCCATTAACTCTGCTGTGGGGGCTCTTTTAGTCAGCTTCACTGTTTACATCATTCCTGCTTCTGCCCATATGCTCACCTACAAGTCTGCCTCTGCAAGACAGGTAAATGGTCCAATCTCTCCATATCTCAATACTCCTGTTTCTAGTTTCTACCTAAATGCCGCAGAGAAATTGCCCGTCTTTATCCCTAACTGGACGGTAATGTACGTGGTGAATGCATTTGTGGTGATTTGGGTTCTAGTGGTGGGCTTTGGATTTGGAGGATGGGCCAGCATGACAAACTTCATCAAGCAGGTTGACACATTCGGGCTATTTGCCAAGTGTTACCAGTGCCCACCCAAAGTGATGGCCTCTAACCACACCTTGCATCACTGA 1491 0.4554 MLPQKQAEEAMVPSLNQTIEHDEGEEVKEDNSHFSFKSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQIFYGLLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMTIAALVHGQVENVTHSGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTLPSATAVYWAFGDQLLDHSNAFSLLPRSGWRDTAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYKSASARQVNGPISPYLNTPVSSFYLNAAEKLPVFIPNWTVMYVVNAFVVIWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKVMASNHTLHH. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02126 496 Pfam Transmembrane amino acid transporter protein 42 407 IPR013057 -
Seca6g02126 496 PANTHER OS05G0424000 PROTEIN-RELATED 48 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02126 Seca-Chr6 81344934 81350040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02126 4 483 Organic Solute Cotransporters AT2G21050 74.167 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02126 K13946 - gmx:100795466 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00924 8 12432838 12438800 Seca6g02126 6 81344934 81350040 ECH
Seca6g02126 6 81344934 81350040 Seca6g02126 6 81344934 81350040 ECH
Seca8g00924 8 12432838 12438800 Seca6g02126 6 81344934 81350040 PCT