Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00912 ATGGGAAGGTTGTTTGCGGTCCATCTGGAAGGGAAGATCTATAGCTGCAAACACTGTAGGACCCATCTTGCTCTTTGTGAAGACATCGTTTCCAAGTCTTTCCACTCCAGACATGGGAAAGCTTATCTCTTCAGCAAGGTAGTGAATGTTTCTGCTGGGGAGAAAGAGGACAGACAGATGCTCACTGGGATGCATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTGGGTTGGACATATGTAAGATTTGTATCAGGGCTTCAAAGGTATGGTTTTTATGTTTCCATGTACCATTAA 306 0.4412 MGRLFAVHLEGKIYSCKHCRTHLALCEDIVSKSFHSRHGKAYLFSKVVNVSAGEKEDRQMLTGMHTVADIFCVGCGSIVGWTYVRFVSGLQRYGFYVSMYH. 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00912 101 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 93 IPR039058 -
Seca8g00912 101 ProSiteProfiles Yippee domain profile. 12 101 IPR034751 -
Seca8g00912 101 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 87 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00912 Seca-Chr8 12246751 12251321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00912 - - zju:107413855 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00912 8 12246751 12251321 Seca8g00912 8 12246751 12251321 ECH
Seca8g00912 8 12246751 12251321 Seca6g02119 6 81241618 81244881 ECH
Seca8g00912 8 12246751 12251321 Seca6g02119 6 81241618 81244881 PCT