Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02119 ATGGGAAGGTTGTTTATGGTGAATCTAGAAGGGAAGATCTATAGCTGCAAACACTGCCGCACCCATCTTGCGCTATACGAAGACATCGTTTCCAAGACTTTCCACTGCAGACATGGGAAAGCTTATCTCTTCAATAAAGTCGTGAATGTTTCTCTTGGTGAAAAAGAGGAGAGACTGATGATGACTGGGTTACATACTGTCGCTGACATTTTCTGCGTGGGTTGTGGATCGATTGTGGGTTGGAAATATGAGACTGCCCATGAAAAAGGCCAGAAGTACAAGGAAGGAAAATCTGTGCTTGAACGGTACAAGGTGTCAGGTCCTGATGGAAGCAATTATTGGATCAGCCATGAAGCACATGTTGTTGGAAGTGATGCAGATGATGCATAA 390 0.441 MGRLFMVNLEGKIYSCKHCRTHLALYEDIVSKTFHCRHGKAYLFNKVVNVSLGEKEERLMMTGLHTVADIFCVGCGSIVGWKYETAHEKGQKYKEGKSVLERYKVSGPDGSNYWISHEAHVVGSDADDA. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02119 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Seca6g02119 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Seca6g02119 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02119 Seca-Chr6 81241618 81244881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02119 - - cit:102609322 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00912 8 12246751 12251321 Seca6g02119 6 81241618 81244881 ECH
Seca6g02119 6 81241618 81244881 Seca6g02119 6 81241618 81244881 ECH
Seca8g00912 8 12246751 12251321 Seca6g02119 6 81241618 81244881 PCT