Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00910 ATGGGTTTTACAAAGGAAGAGAAATCGAAAAGGATATTGAGGGGTGTGAAGACACTTTTCTTCTTGATCACCATGGTTCTATCGCTGCTTCTTTTCTCCGCACCAATTCTCTTGGTTATTGCTGATGCATTGATTCCTTCTGCTTTATTCTCTGCTTTTTCCCCTGTTTCTCTCTCCCTCCAAACTCTGTTTTCCCATTTGGAGAACTACGATTTTCGATACTCACTCATTGATATACCCCTCGTATCCATTATACGATCCCTCATCATCTTATGTGTGTATAGTTTCTGTGATGGACCAAGACTCTCACATGGACCTTATTTGGGAATCACCACGACATGCTCTGTGATGTCTCTGATGTTTGTTTCCCTAAAATCTGTTTATGTCTTTAGTAGCAGAAACTTGAGTGTTGATGGAGGAGGGTTTGATAGAGCCTCTGAAATTGCTCTGTTCGTGTGCTCTTGTGTTTTAGCTGTGGGGCATGTGGTTGTTGCCTACAGAACAAGTTGCAGAGAAAGACAAAAGCTTTTAGTCTACAAAATTGACCTTGAAGCTGTAAGAGTCTCCATCCTTCTTTCCTTTCTAACAAAACAAAATAGTAAGCAAGAAGATTTGCCTAATTTTTGTTTTTTTTTTGGGTAA 642 0.3972 MGFTKEEKSKRILRGVKTLFFLITMVLSLLLFSAPILLVIADALIPSALFSAFSPVSLSLQTLFSHLENYDFRYSLIDIPLVSIIRSLIILCVYSFCDGPRLSHGPYLGITTTCSVMSLMFVSLKSVYVFSSRNLSVDGGGFDRASEIALFVCSCVLAVGHVVVAYRTSCRERQKLLVYKIDLEAVRVSILLSFLTKQNSKQEDLPNFCFFFG. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00910 213 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 195 - -
Seca8g00910 213 Pfam Cholesterol-capturing domain 60 129 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00910 Seca-Chr8 12149611 12150370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00910 2 186 Miscellaneous Gene Families AT1G80280 42.784 4.85e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00910 - - aprc:113847878 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00910 8 12149611 12150370 Seca8g00910 8 12149611 12150370 ECH
Seca8g00910 8 12149611 12150370 Seca6g02114 6 81168895 81171919 PCT