Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02114 ATGGGTTGGAAGCAAATCATAGGAACTAAGATGGGTTTTTCGTTTAAGGAAGAGAAATCCAAGAGAATTTGGAGGGGCTTGAAGACTGTGTTCTTCTTGATCACCATGGTTCTATCGCTTCTTCTTTTCTCTGCCCCAATTCTTCTGGTTATCACTGATGCGCTTGTTCCTTCTGCTCTGCTCTCTACACTTTCCCCTTCTTCTCTCTCCCTGGAAACTCTCTCTTCCCATTTCTACAACTACGATTTTCGATACTCTCTCATTGATATACCCCTCGTCTCCATAATAAGATCCTTCATCATCTTCTGTGTTTATAGTTTGTGTGATGGACCAAGACTTTCTCGAGGGCCTTATTTGGGGATCACGACGATGTGCTCTGTTTTGTCTCTGATATTTGTTTCGTTCAAAGGTGTTTACATATTCAGCAATCGAAGTGGGTATGTTGCAGCCACCGAAATAGCTCTGTTCGTGTGCTCTTATGCGTTGGCTGTGGGCCATATCGTTGTGGCCTACAGAACAAGTTGCAGAGAAAGACGAAAGCTTTTGGTTTACAAGATTGACATTGAAGCTATCTCGGCTTGCAAAAATGGGTATCCCATTCCCAGGTATCCAAAGATTCTTCAAGGAGAACGAATCAAATGA 642 0.4283 MGWKQIIGTKMGFSFKEEKSKRIWRGLKTVFFLITMVLSLLLFSAPILLVITDALVPSALLSTLSPSSLSLETLSSHFYNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSRGPYLGITTMCSVLSLIFVSFKGVYIFSNRSGYVAATEIALFVCSYALAVGHIVVAYRTSCRERRKLLVYKIDIEAISACKNGYPIPRYPKILQGERIK. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02114 213 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 11 212 - -
Seca6g02114 213 Pfam Cholesterol-capturing domain 71 164 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02114 Seca-Chr6 81168895 81171919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g02114 15 213 Miscellaneous Gene Families AT1G80280 43.119 3.07e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02114 - - gmx:100811069 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g02114 6 81168895 81171919 Seca6g02114 6 81168895 81171919 ECH
Seca8g00910 8 12149611 12150370 Seca6g02114 6 81168895 81171919 PCT