Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00848 ATGCCTTCACCTCTTCAACTCCATCGATTCAACCATGCCACCGACACAGCCACAGCCAACGCTATCGCAAACGGCGTTAACTGTCCTAAACAAACCCAAACGCGCCGTTTCACGCTTAAAGTAAGCGTACCTGACACGATTGCCCAACACCACGCGCATGTTATTGGGCCTAACCAGTGTTGCTCCGTCGTGGCCCAGCCCATTAACGCTCCCGTTTCAACCGTTTGGTCAGTTGTGCGTCGCTTCGACAACCCGCAAGGGTACAAGCACTTCGTCAAGAGCTGCCACGTGGTCTCCGGCGACGGCGACGGCATTCGCGTCGGCGCACTCCGTGAAGTCCGGGTTGTGTCGGGGCTCCCTGCTGTGTCAAGCACGGAGAGGCTTGAGATTTTGGACGACGAGCGCCACGTCATCAGTTTTAGCGTCGTCGGTGGAGACCACCGCCTTAGGAATTACAGGTCGGTGACGACGCTGCACGGTGACGGTAACGGAGGGACAGTTGTCATTGAATCATACGTCGTTGATGTACCGCACGGTAACACGAAGGAGGAAACGTGCATTTTCGTGGACACAATCGTACGCTGCAATTTGCAGTCACTGGCTCAGATCGCAGAGAACATGGCACTCAACAATGCTAATGAAGAAACCGTTTTCTAG 657 0.5479 MPSPLQLHRFNHATDTATANAIANGVNCPKQTQTRRFTLKVSVPDTIAQHHAHVIGPNQCCSVVAQPINAPVSTVWSVVRRFDNPQGYKHFVKSCHVVSGDGDGIRVGALREVRVVSGLPAVSSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPHGNTKEETCIFVDTIVRCNLQSLAQIAENMALNNANEETVF. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00848 218 Gene3D - 21 217 IPR023393 -
Seca8g00848 218 SUPERFAMILY Bet v1-like 59 203 - -
Seca8g00848 218 Pfam Polyketide cyclase / dehydrase and lipid transport 61 205 IPR019587 -
Seca8g00848 218 PANTHER - 58 205 - -
Seca8g00848 218 CDD PYR_PYL_RCAR_like 60 205 - -
Seca8g00848 218 FunFam Abscisic acid receptor PYL4 23 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00848 Seca-Chr8 11313067 11313723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00848 K14496 - gmx:100798803 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00848 8 11313067 11313723 Seca6g02050 6 79862130 79862798 ECH
Seca8g00848 8 11313067 11313723 Seca8g00848 8 11313067 11313723 ECH
Seca8g00848 8 11313067 11313723 Seca6g02050 6 79862130 79862798 PCT