Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g02050 ATGCCTTCTTCTCTTCAGTTAGAGAGGTTCAATCCTACCACCGACGCCACCGCCTCCGCCGCCATCGCCAACGGAATAAACTGCCCGAAGCAGCCTCAAGCTCCGCCACCTACGGCGGCGCGTCGTCTCGTCGTGCCGCTCCCGGTGTCTCTCTCTTCCGCAGACAACGCGGCTCTCCTCCACGCGCACGCGGTTGGACCTAACCAGTGTTGCTCCGTCGTGACGCAACCAATCGACGCGCCTGTCTCCGCCGTGTGGCCGGTGGTTCGGCGATTTGACAATCCGCAAGGATACAAGAACTTCGTGAAGAGCTGCCACGTCATCGCCGGCGATGGCATTAACGTCGGCGCCGTCCGTGAGGTCCGAGTGGTGTCTGGTCTTCCCGCCGAGTCGAGCACCGAACGGTTGGAGATCCTCGACGATGAGCGCCACGTTATCAGCTTCAGCGTCGTCGGAGGTGACCACCGTCTGAGGAACTACCGGTCTGTGACGACGCTTCATCCGAACGGGAACGGGACACTTGTCATCGAATCATACGTCGTTGATATACCGCAAGGTAACACGAAGGAAGACACGTGCGTGTTTGTTGATACAATCGTGCGTTGTAATTTGCAGTCGTTGGCTCAGATCGCTGAGAACGTGACCAGAAATTCTGAGCAAAGCTCATAA 669 0.58 MPSSLQLERFNPTTDATASAAIANGINCPKQPQAPPPTAARRLVVPLPVSLSSADNAALLHAHAVGPNQCCSVVTQPIDAPVSAVWPVVRRFDNPQGYKNFVKSCHVIAGDGINVGAVREVRVVSGLPAESSTERLEILDDERHVISFSVVGGDHRLRNYRSVTTLHPNGNGTLVIESYVVDIPQGNTKEDTCVFVDTIVRCNLQSLAQIAENVTRNSEQSS. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g02050 222 PANTHER - 68 212 - -
Seca6g02050 222 SUPERFAMILY Bet v1-like 69 210 - -
Seca6g02050 222 CDD PYR_PYL_RCAR_like 70 212 - -
Seca6g02050 222 Gene3D - 50 222 IPR023393 -
Seca6g02050 222 FunFam Abscisic acid receptor PYL4 37 222 - -
Seca6g02050 222 Pfam Polyketide cyclase / dehydrase and lipid transport 70 212 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g02050 Seca-Chr6 79862130 79862798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g02050 K14496 - gmx:121174020 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00848 8 11313067 11313723 Seca6g02050 6 79862130 79862798 ECH
Seca6g02050 6 79862130 79862798 Seca6g02050 6 79862130 79862798 ECH
Seca8g00848 8 11313067 11313723 Seca6g02050 6 79862130 79862798 PCT