Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00830 ATGGTTTCGGTTGATAATGGTAAAGATGAAATTGAGGAATCTAATGGAAGTAAAGGAAAGGAATTCGCTTCCATAGATATTTCATCTTCTCGAAGAACATTGGTGAGCAATGAAAATCCTGGGAGAAAGTTTCAGGGCACCTTGAATTCTATTCCCAATAGGATCAAGTTCTTCAAATTTGGTTCTGCATCTACCAAATTCAAGCGTCTTGCTACTGAGAAGGACCAGATTTCACAATCTGTGCCTTCTCCTAGTTCACAAAGCTTAAGAGAACGCTTCAGTGGCATGTTTGCTAAGAAACTTGACTGGGGTTCAATCAAGAAGATGTGCATAGAATGGATTAGGAACCCAATGAACATGGCCCTTTTTGTGTGGATCTTCTGTGTTGCTGTTTCAGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAATGGTGTGCTTCCAAAGAAGTCTCAGAGGAATGCATGGTTTGAAGTAAACAATCAAATACTCAATGCACTGTTTACACTAATGTGTTTGTACCAGCATCCAAAGAGGATCTACCACCTTGTACTTCTGTGTAGATGGAGTCCAAAAGATATCTCCAGACTTAGAAAGGTGTACTGCAAGAATGGAACTTATAAGCCCCATGAGTGGGCACACATGATGGTAGTGATCATTCTCCTTAATGTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTGGGGTATAAAAGATCTCAGCGCCCAGCCATAGGAGTTGGAATATGCATATCTTTTGCAATTGGTGCTCCTGCAATTGCTGGTCTGTATACCATTCTTAGCCCGCTAGGTAAAGATTATGATTCTGAGATGGATGAAGAAGCACAGACAGAAATTTCTGTTGCTCAAAAGCAAGAGAAGCTGAGAGTGAAATCATTTGAGAAGAAATTTTCATTTGCATCCAGGGATCAACGAAGGGTTATTGAAACTAGACCACAATGGAGTGGAGGAATACTTGACATTTGGGATGATATTTCTCAAGCATATCTATCACTTTTCTGTACCTTTTGTGTCTTTGGTTGGAATATGGAGAGACTTGGCTTTGGAAACATGTATGTTCATATTGCCACTTTTATGCTGTTCTGTATGGCTCCTTTCTGGATTTTTACCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGACAGGCTCTAGTAGCTACTGGAATCATTCTATGTTTTTTCGGTTTACTGTATGGTGGCTTTTGGAGGATGCAAATGAGAAAGAGGTTCAATTTGCCTACTTATGACTTCTGTTTTGGCAAGGCTTCAGCTTCTGATTGCACACTTTGGCTATGCTGCTGCTGGTGCTCTCTTGCTCAAGAAGTAAGGACAGGGAATGCCTATGGTGTTGTAGAAGATAAATTCTGCAGGAAAGAAAGTTATACAAATGACCAATTGCCAATTTCACCTTTGCCTCGTGAAGATGTTGTATCAACCAAATCTGGCACAAGTTCTCCCCTAGGTATCAACTCTTCCTCTTCTATAATCAAACCATCTAGTCCTCTCAGTTCAAGCAATTTCTTTAAGGGATACCATAGTCCAGATAGGCCACTATCTTCAGTAACAGAAGAGTTCTCTGAAAGAGGTAAAGATGGGACAATGAACCCACCAACTCCACCATTAATTCAAAGAGACCCTGAAGATAAAAATTAG 1686 0.4033 MVSVDNGKDEIEESNGSKGKEFASIDISSSRRTLVSNENPGRKFQGTLNSIPNRIKFFKFGSASTKFKRLATEKDQISQSVPSPSSQSLRERFSGMFAKKLDWGSIKKMCIEWIRNPMNMALFVWIFCVAVSGAILFLVMTGMLNGVLPKKSQRNAWFEVNNQILNALFTLMCLYQHPKRIYHLVLLCRWSPKDISRLRKVYCKNGTYKPHEWAHMMVVIILLNVNCFAQYALCGLNLGYKRSQRPAIGVGICISFAIGAPAIAGLYTILSPLGKDYDSEMDEEAQTEISVAQKQEKLRVKSFEKKFSFASRDQRRVIETRPQWSGGILDIWDDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFTLAAVNIEDDTVRQALVATGIILCFFGLLYGGFWRMQMRKRFNLPTYDFCFGKASASDCTLWLCCCWCSLAQEVRTGNAYGVVEDKFCRKESYTNDQLPISPLPREDVVSTKSGTSSPLGINSSSSIIKPSSPLSSSNFFKGYHSPDRPLSSVTEEFSERGKDGTMNPPTPPLIQRDPEDKN. 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00830 561 MobiDBLite consensus disorder prediction 21 40 - -
Seca8g00830 561 NCBIfam uncharacterized Cys-rich domain 323 455 IPR006461 -
Seca8g00830 561 MobiDBLite consensus disorder prediction 487 521 - -
Seca8g00830 561 PANTHER PLAC8 FAMILY PROTEIN-RELATED 3 556 - -
Seca8g00830 561 MobiDBLite consensus disorder prediction 1 19 - -
Seca8g00830 561 Pfam PLAC8 family 324 454 IPR006461 -
Seca8g00830 561 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Seca8g00830 561 MobiDBLite consensus disorder prediction 1 40 - -
Seca8g00830 561 MobiDBLite consensus disorder prediction 478 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00830 Seca-Chr8 11026093 11027778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00830 - - gmx:100795088 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00830 8 11026093 11027778 Seca6g02011 6 79223467 79226559 ECH
Seca8g00830 8 11026093 11027778 Seca8g00830 8 11026093 11027778 ECH
Seca8g00830 8 11026093 11027778 Seca6g02011 6 79223467 79226559 PCT