Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca8g00820 | ATGGAGGCAATTCAGTCGTGGGTTTCAAAACACAAGCTCGCCACAGTTGGGGGATTATGGGCCTCTGGAATTGGAGCAACACTTGTAGCTTATTCACGTACAGGGTCTCCAATGAAGCCAAGTCTTAGGCTTATCCATGCTAGATTACACGCCCAGGCGTTGACACTAGCAGTGTTGACCGGTGCTGCTGCTTATCACTACTATGAGAATCGTGTTGGTGAGCCAAAACCAGTGGTGGAGAGTCCTGCTTCGAGTATGGCCGAGGTTGTTGAATGGGAGCTCCTCAGTCCTTTCTAA | 297 | 0.4983 | MEAIQSWVSKHKLATVGGLWASGIGATLVAYSRTGSPMKPSLRLIHARLHAQALTLAVLTGAAAYHYYENRVGEPKPVVESPASSMAEVVEWELLSPF. | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca8g00820 | 98 | Gene3D | - | 14 | 72 | - | - | |
| Seca8g00820 | 98 | Pfam | Hypoxia induced protein conserved region | 11 | 61 | IPR007667 | - | |
| Seca8g00820 | 98 | PANTHER | RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL | 1 | 74 | IPR040153 | - | |
| Seca8g00820 | 98 | ProSiteProfiles | HIG1 domain profile. | 1 | 77 | IPR007667 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca8g00820 | Seca-Chr8 | 10882799 | 10884292 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca8g00820 | - | - | gmx:100500345 | 138.658 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Seca8g00820 | 8 | 10882799 | 10884292 | Seca8g00820 | 8 | 10882799 | 10884292 | ECH | |
| Seca8g00820 | 8 | 10882799 | 10884292 | Seca6g01998 | 6 | 79011351 | 79012519 | PCT |