Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g01998 ATGGAGGCAGTTCAATCATGGGTTTCAGAGCACAAGCTAACCAGCATTGGGGCACTCTGGGCCTCTGGGATTGGAGCATCACTTGTGGCTTCTTCATTCATTAAGTCTCCAATGAAGCCAAGTCTCAGGCTTATCCATGCTAGGATGCATGCACAGGCGCTAACACTGGCAGTGCTATCTGGTGCAGCTGCTTATCACTATTATCAGAATCGTTCTGTTCAAGTTCAACCAAAACCAGAGGAACATAGCCCTGCTCCCAGTATCACTCAACTCGTTGAATGGGAACTCCACAGTCCTTTCTAA 303 0.4785 MEAVQSWVSEHKLTSIGALWASGIGASLVASSFIKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYQNRSVQVQPKPEEHSPAPSITQLVEWELHSPF. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g01998 100 Pfam Hypoxia induced protein conserved region 10 61 IPR007667 -
Seca6g01998 100 Gene3D - 14 73 - -
Seca6g01998 100 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 1 76 IPR040153 -
Seca6g01998 100 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g01998 Seca-Chr6 79011351 79012519 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g01998 - - gmx:100500345 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g01998 6 79011351 79012519 Seca6g01998 6 79011351 79012519 ECH
Seca8g00820 8 10882799 10884292 Seca6g01998 6 79011351 79012519 PCT