Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05136 ATGATGAGTGATCATCGAGCAGGACGCGAGGGTGACATTGTCCAACAGATCAATAGAGGTTTTGTAAATCTTACAGGGCACGTTACAGGAAATGGGAATGGGAATGTTCATGTAATAGTCATTAATAGAGTTGAACGACTCTATTACCTTCGGCCACCACCAGGTAGTTATAATTATAATGAGCAACGATCATTTTCATGGACACGGGAAGATAGCAGCGAAAAGCAGATAACATGTACATCTGGGAATGAAAAATTGGTGAGTAAAAGTAGTTCTAGTTCAACATCGTCATCCTCCTTGTCCACAGCAACAACAGGGGAAGACAAATTGTTCAAAAATAGAGGTTTGTCATCTCCTCCTTTAACAGCAGCTCCTTCCTCATCCAGACCACGTAAGCGCGCAGTTCTCTGTGGAGTTACATACAGCAAAAGGAGGTTCAGTCTCAAGGGAACCATTAATGACGTTATTAACATGAAAACTCTACTGCTTAATAAATTTAACTTCCAAATGGAGAGTATACGTGTCCTCACAGAAGAAGAGATCAATCCCAATTTAATTCCAACAAAGAGGAACATAATGGAATCCTTAAAGTGGCTAGTGAATGGCTGCCAGGCAGGAGACTCACTGGTGTTCTACTTCTCTGGACATGGTTTGCAACAACCAGCTGAAGATGACAAAGGAGATGAAATTGACGACCTTGATGAAGCTATTTGTCCTGTTGATTTTATAAAAGAAGGAATGATCACTGACAATGAAATGAATTCTACCATTGTTCGGCCACTCAAGAACGGTGTCACACTTCATGCTATTTTTGATTCAGGTCATAGTGCAACAACTCTTGATCTCATGCATGTTTATACAAAAGTAAATGGCAAATGGAAATGGGTGGATAACAAGCCCCCAAGTAAAGAACCTATTGTTAAAGATACAAGTGGTGGTTTGGTTATCTGTCTCAGTGCTTGTGAAGACAATCAGATGGCTGCTGAAACTGCAGTAAGAATCTTTAATATTTTTCATCTGTAA 1023 0.3998 MMSDHRAGREGDIVQQINRGFVNLTGHVTGNGNGNVHVIVINRVERLYYLRPPPGSYNYNEQRSFSWTREDSSEKQITCTSGNEKLVSKSSSSSTSSSSLSTATTGEDKLFKNRGLSSPPLTAAPSSSRPRKRAVLCGVTYSKRRFSLKGTINDVINMKTLLLNKFNFQMESIRVLTEEEINPNLIPTKRNIMESLKWLVNGCQAGDSLVFYFSGHGLQQPAEDDKGDEIDDLDEAICPVDFIKEGMITDNEMNSTIVRPLKNGVTLHAIFDSGHSATTLDLMHVYTKVNGKWKWVDNKPPSKEPIVKDTSGGLVICLSACEDNQMAAETAVRIFNIFHL. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05136 340 Pfam Caspase domain 131 329 IPR011600 GO:0004197|GO:0006508
Seca6g05136 340 SUPERFAMILY Caspase-like 121 243 IPR029030 -
Seca6g05136 340 Gene3D - 66 336 - -
Seca6g05136 340 PANTHER METACASPASE-4 128 331 - -
Seca6g05136 340 MobiDBLite consensus disorder prediction 70 129 - -
Seca6g05136 340 MobiDBLite consensus disorder prediction 70 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05136 Seca-Chr6 118505405 118512400 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05136 K22684 - gmx:100796278 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05190 12 140465484 140471722 Seca6g05136 6 118505405 118512400 PCT