Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g05092 ATGGGGGAGACGACGGAGAAGGTGAAAGCTGAGGCAGTGAAGATAATTGAAGCTTTCGAAGTTCTGCCAAAGCTTGTAGTTTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGGTCGAAGCGGGAAATGCCTTCTCTGTATCCCCACGCGAAGGGAATATTGTTGGCTCTCAAAGAGAAAGGGATTGATGTTGCCATTGCTTCTCGATCTCCCACCGCTGATATAGCAAAGGCCTTTCTCAACAAATTGAACTTCAACTCTATGTTCGTCGCCCAGGAAATATATTCCAGTTGGACGCACAAAACTGATCATTTTCAGAGAATTCATTCAACCACTGGGGTCCCCTTCCACACTATGCTCTTCTTTGATGATGAGAATAGAAACATCCAAGCGGTCTCTAAAATGGGAGTAACTAGCATTTTGGTTGGAGATGGGGTGAATCTTGGATCATTAAATCAAGGTCTTTCACAATTTTCTCGAAATTGGAATGCATCACAGAAGAACAAGCAAAAATGGCTCAACAACTACTCTCACAAGCCAGATACTTCGAACCATGCTCAGTGA 576 0.4392 MGETTEKVKAEAVKIIEAFEVLPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGILLALKEKGIDVAIASRSPTADIAKAFLNKLNFNSMFVAQEIYSSWTHKTDHFQRIHSTTGVPFHTMLFFDDENRNIQAVSKMGVTSILVGDGVNLGSLNQGLSQFSRNWNASQKNKQKWLNNYSHKPDTSNHAQ. 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g05092 191 NCBIfam HAD-IIIC family phosphatase 24 139 IPR010033 -
Seca6g05092 191 FunFam Magnesium-dependent phosphatase 1 8 168 - -
Seca6g05092 191 Pfam Acid Phosphatase 49 164 IPR010036 GO:0016791
Seca6g05092 191 Pfam Acid Phosphatase 22 43 IPR010036 GO:0016791
Seca6g05092 191 SUPERFAMILY HAD-like 23 155 IPR036412 -
Seca6g05092 191 Gene3D - 4 169 IPR023214 -
Seca6g05092 191 CDD HAD_MDP-1_like 23 146 IPR035679 -
Seca6g05092 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 3 172 IPR010036 GO:0016791
Seca6g05092 191 SFLD Haloacid Dehalogenase 4 171 - -
Seca6g05092 191 SFLD C1.5.2: MDP Like 4 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g05092 Seca-Chr6 118173153 118174309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g05092 K17619 - gmx:100305763 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05126 12 139253479 139254626 Seca6g05092 6 118173153 118174309 PCT