Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05126 ATGTATGCACTCAAACACAAGGGGATTGATGTTGCCATTGCTTCCAAGTCACCAACTCCTGACATAGCTACAACCTTTCTTGACAAACTCAGCATCAAGTCAATATTTGTCGCCCAGGAAATATTTTACAGCTGGACACCCAAAACAGATCATTTTCAGAGAATTCATTTAGGGACTGGAGTCCCCTTTAACTCTATGCTGTTTTTTGATGATGATGATAAGAACATCCAAGCGGTCTCAAAAATGGGAGTCACAAGCATTTTGGTTAGAGATGGAGTAAATCTTGGAGCATTTAAAGAAGGCCTTACAAAATTTTCTCAAAACCGGAATGCATCAAAGAACAAGCAGAAAAGGCATAGATAA 363 0.3912 MYALKHKGIDVAIASKSPTPDIATTFLDKLSIKSIFVAQEIFYSWTPKTDHFQRIHLGTGVPFNSMLFFDDDDKNIQAVSKMGVTSILVRDGVNLGAFKEGLTKFSQNRNASKNKQKRHR. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05126 120 Gene3D - 1 112 IPR023214 -
Seca12g05126 120 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 115 IPR010036 GO:0016791
Seca12g05126 120 SUPERFAMILY HAD-like 3 101 IPR036412 -
Seca12g05126 120 Pfam Acid Phosphatase 2 107 IPR010036 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05126 Seca-Chr12 139253479 139254626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g05126 K17619 - rcu:8266871 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05126 12 139253479 139254626 Seca12g05126 12 139253479 139254626 ECH
Seca12g05126 12 139253479 139254626 Seca6g05092 6 118173153 118174309 PCT