Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04709 ATGGACCCACCACCTTCAATCCATGAACATCAAGATGAACACGACGACGTTTTCATCGACGCGCTTCCCTGCTGCCTCGCCAAGGACCCGCCGGAACCTTCTGCCTCAGCTTCTACGCTTCCCGATCCTCGACCCGTTTCACCCGAACCTCAGGATTCGCATCCCAATCCACCCTCTCCGGCGACAACACTCCGGCGCCGGCCAATTCGTCGTGGATTTCCGCGTAAGGAATCGTCGGATTTGAGTACCAACAGCGATTTGATTAATGAAGCGAGAAGAAGCTTCCGAAATCTCAAGGAAGATGAGAATTTCGCTGCGAAACCCGATTCGGATGAAGCGCAACATGTTAGCGATTCGCAAGCTTCGATTCCCGTGACGGAAGAGAATAACAAGGAGGAATCGACGGTAACTACAGCTATGAATGATGATGAAGCTGGGGATTACGCTGACTCGGCGCCGCGACTCGGCGACTCGTCTTCGAGTTTTCTCGAATTCATAGCGGGATTAGTGATTAAGGCATTAGGGTTTCAAATCAAGTTAATTATTATGTTTGTGACTTATCCGTTACTGTTCCTGTTTCGGTGTTGCATGTTTTTCATCGATCCTTTCGGAACAACGAGGTGGGGCAAGCAATTTTTGGTTGGGATTTTGTGCAGAGTGTGGGGTGTTTTGTTTGGATGCATTAGACCATACATTCGGAGATGGTTTAAGGAAAACGAGTCAATTTGGAGCGTGGCATTTCGGTTTGGATGGGGGTTCTTGTGGTCAATCTATGTTTGTTGCGTTTTGTTTGGTCTCTTGGTTTCGTCGTTTGTGTTTGGTGGGTTTTTGATGAAGTGCTTTGTAGAGAAGCCAATTCAGATGAGGGAAGTTTTGAACTTTGATTACACTAAGCATAGTCCTGTGGCATATGTGCCCATAGTATCATGTGCTGGTGTTGTTGGTGGGAAAGATTCTGAGAATAATGTTGATGTTACTAAGTGGATGAGTGAACGGGTTATACCTTCTAAACACAAAGTGCAAGTCACTGTTTCATTAAGAATGCCAGAGTCAGGGTACAACAGAAATCTTGGGGTCTTTCAGGCCAGGGTAGATTTTCTATCGTTTAATGGTAAAACCATTGCAAGCTCAAGCCAACCCTGCATGTTAAGATTCACAAGTGAGCCTATCCGCCTATTCACGACTTTCCTCAAGATTGCTCCTCTTGTTACCGGCTATCTATCTGAAACTCAGATGCTGAATGTCAAGATGAGAGGATTTGTTGAAGGGAATGTACCTACTTCGTGCTTGAAAGTGACACTCGAGCAAAGAGCAGAATATCAACCTGGTGCTGGCATTCCTGAAATATATGATGCATCTCTGGTTATTGAGTCCGAACTTCCCTTTTTCAAGAGGATCATTTGGCATTGGAAGATGAGTATATTTATATGGATCACGATGATGACATTCTTCACGGGGTTAATTTTTGTTCTATTATGTTGTAGGCCTATATTAATTCCGAGAACAAGGCAAAGGGTGGCTTCTGCTCGCGGTCCTGCAACCTTAAACAGTCTTCAGGCACAAAGTTGA 1569 0.4525 MDPPPSIHEHQDEHDDVFIDALPCCLAKDPPEPSASASTLPDPRPVSPEPQDSHPNPPSPATTLRRRPIRRGFPRKESSDLSTNSDLINEARRSFRNLKEDENFAAKPDSDEAQHVSDSQASIPVTEENNKEESTVTTAMNDDEAGDYADSAPRLGDSSSSFLEFIAGLVIKALGFQIKLIIMFVTYPLLFLFRCCMFFIDPFGTTRWGKQFLVGILCRVWGVLFGCIRPYIRRWFKENESIWSVAFRFGWGFLWSIYVCCVLFGLLVSSFVFGGFLMKCFVEKPIQMREVLNFDYTKHSPVAYVPIVSCAGVVGGKDSENNVDVTKWMSERVIPSKHKVQVTVSLRMPESGYNRNLGVFQARVDFLSFNGKTIASSSQPCMLRFTSEPIRLFTTFLKIAPLVTGYLSETQMLNVKMRGFVEGNVPTSCLKVTLEQRAEYQPGAGIPEIYDASLVIESELPFFKRIIWHWKMSIFIWITMMTFFTGLIFVLLCCRPILIPRTRQRVASARGPATLNSLQAQS. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04709 522 Pfam Putative adipose-regulatory protein (Seipin) 266 482 IPR009617 GO:0019915
Seca6g04709 522 MobiDBLite consensus disorder prediction 43 57 - -
Seca6g04709 522 MobiDBLite consensus disorder prediction 105 150 - -
Seca6g04709 522 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 150 521 IPR009617 GO:0019915
Seca6g04709 522 MobiDBLite consensus disorder prediction 115 141 - -
Seca6g04709 522 MobiDBLite consensus disorder prediction 1 19 - -
Seca6g04709 522 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04709 Seca-Chr6 114644628 114647232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04709 K19365 - gmx:100796452 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04709 6 114644628 114647232 Seca6g04709 6 114644628 114647232 ECH
Seca6g04709 6 114644628 114647232 Seca12g05939 12 151194676 151197527 ECH
Seca12g05939 12 151194676 151197527 Seca6g04709 6 114644628 114647232 PCT