Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g04381 ATGAAGGGTCTCTTCAAGTCCAAACCACGCACGCCTGTTGATATTGTGCGCCAGACCAGAGATCTTCTCCTCGTCTTCGATCGCAGCCCCGAAACCCGCGAAAGCAAGCGCGAAGAGAAACAAATGTCCGAGCTATGTAAAAATATCAGGGAGCTAAAGTCAATCCTTTATGGAAATAGTGAATCTGAACCGGTCTCAGAAGCTTGTGCACAATTGACTCAAGAATTCTTTAAAGAGAACACGTTGCGACTGCTTATCAAATGTATTCCAAAATTGAATTTGGAGGCCAGAAAAGATGCCACTCAAGTTGTTGCAAATTTACAAAGGCAACAGGTTCAGTCTAAGTTGATTGCATCTGATTACCTGGAGAAAAATATGGATCTTATGGATACTTTGATAGTTGGCTATGAAAACACAGACATGGCTTTACACTATGGTGCGATGCTGAGGGAGTGCATAAGACACCAAATTGTTGCAAAATATGTTCTGAACTCACCTCTTATGAAGAAGTTTTTTGACTATATTCAACTTCCAAATTTCGACATTGCTGCAGATGCTGCAGCAACTTTTAAGGAACTCTTGACAAGACATAAATCTACTGTAGCTGAATTCCTTTGTAAGAATTATGAATGGGTAAGTTCAACTTCAACCTGCTTTCAGTTTTTTGCAGAATATAACTCTAAGCTGTTGGAATCTTCCAATTATATTACAAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATGTTACTTGATCGTTCAAACTCAGCTGTGATGACACGATATGTGAGCTCAAGAGACAACTTGAGGATTTTGATGAATCTTCTAAGAGAGTCAAGCAAGAGCATACAGATAGAAGCATTTCATGTTTTCAAGCTATTTGCTGCTAACCAAAATAAACCAGCTGATATTGTCAGCATACTTGTTGCAAACAAAAGTAAGATTCTGAGACTGTTAGATGACTTCAAAATCGATAAAGAGGATGAACAGTTTGAAGCTGACAAAGCTCAAGTGATGCAGGAAATTGCTGCTCTTGAACCTAGGGAACAACGTGCTTGA 1056 0.3958 MKGLFKSKPRTPVDIVRQTRDLLLVFDRSPETRESKREEKQMSELCKNIRELKSILYGNSESEPVSEACAQLTQEFFKENTLRLLIKCIPKLNLEARKDATQVVANLQRQQVQSKLIASDYLEKNMDLMDTLIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPLMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLCKNYEWVSSTSTCFQFFAEYNSKLLESSNYITRRQAVKLLGDMLLDRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVSILVANKSKILRLLDDFKIDKEDEQFEADKAQVMQEIAALEPREQRA. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g04381 351 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 347 IPR013878 -
Seca6g04381 351 FunFam putative MO25-like protein At5g47540 3 344 - -
Seca6g04381 351 Pfam Mo25-like 4 344 IPR013878 -
Seca6g04381 351 SUPERFAMILY ARM repeat 10 347 IPR016024 -
Seca6g04381 351 Coils Coil 35 55 - -
Seca6g04381 351 Gene3D - 3 344 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g04381 Seca-Chr6 111408479 111413199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g04381 K08272 - gmx:100817060 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g04381 6 111408479 111413199 Seca6g04381 6 111408479 111413199 ECH
Seca12g00119 12 1143204 1154190 Seca6g04381 6 111408479 111413199 PCT