Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03962 ATGTCTATGAGTGAGCGCAAGACTATAGACCTAGAACAAGGATGGGATTTTATGCAGAAGGGCATAACGAAGCTGAAGAACATTCTAGAAGGGCTACCTGAGCCTCAGTTCAGCTCTGAGGACTATATGATGCTATACACGACCATATATAATATGTGCACTCAAAAGCCTCCTCATGACTATTCCCAACAACTGTATGACAAGTATCGGGAATCATTTGAAGAGTACATCATATCAACAGAACAATATGGCATGATAGCAGTGACATGTCTTTTCTTCCTTTTAGGAAAATGTGTATCATCATTGATGCAGTTCTTAGAAAGTAGGGTAGTTTTAAAAGATCCAAAACAAGCAAAAAAGAGAAAAAGAGTGTGTGTTTTGGAAGTGAAGGATGCAGCACAGCTGCAGCCACCAAATCAAACATGTAACATAGTCGGACAATCAAGGGATAGAAGGTATGTGCTCAAGATCAAGAACATTAAGTGGTTGGTAGCAACAGTTGTGGGCAGGCTCAGATCCACTGACAAGGGGAATTAA 537 0.4041 MSMSERKTIDLEQGWDFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYIISTEQYGMIAVTCLFFLLGKCVSSLMQFLESRVVLKDPKQAKKRKRVCVLEVKDAAQLQPPNQTCNIVGQSRDRRYVLKIKNIKWLVATVVGRLRSTDKGN. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03962 178 SUPERFAMILY Cullin repeat-like 11 82 IPR016159 -
Seca6g03962 178 Gene3D Cullin Repeats 1 86 - -
Seca6g03962 178 PANTHER CULLIN 9 100 IPR045093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03962 Seca-Chr6 107340090 107341074 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03962 K03347 - lja:Lj0g3v0209709.1 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03962 6 107340090 107341074 Seca6g03962 6 107340090 107341074 ECH
Seca12g00308 12 2785910 2791128 Seca6g03962 6 107340090 107341074 PCT