Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03959 ATGGAAGAGAATACTGAGTTCGAGGAAGGAGAGGCCTGCTATTATAAGGATGATGATGAAGGCAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAACATCTTCTGGGACATTTTCAAAAGGATTTTGAAGGTGGTTTCTCTGCTGAGAATTTGGGTGCAAAATTTGGTGGCTATGGTTCCTTTCTACCTACCTATGAACGCTCTCCTCGTATTTTGTCTCATCCAAAGACTCCACAAAGAAACCACAGCTCACCAAAATCCCCTACCAATCTCCACAAGGAGGCTGTGTCTCATAACAGAAATGCACCTTCAAATATGCCTCCTTGTGCGAGGCTTGGAAATGCTTCCTATTCACATTCATCTCATGATTTAAGAGCAACTTCAGTAGATGACCCAGTGAAGAAAGACAGAGGAATTTCTTCCAATGATGTAGCTGGAAGGTGCATTTTGAAAGATGATTCTACAACAAAGACAGGAAATCCAACTGACCAAAGAACACTGAAGTTTCGAATCAAAGTGAAATCCAACATCTTAGCACAAAAAAATGCAGAAATTTATAGTGGCCTTGGGCTTGATAACTCTCCATCTTCCTCATTGGGGAACAGTCCTGTGGAAAGTGAAGGCATGCCACCTGTATCTCAAGAGAATGCTGAAGATTCTCCAGCTGGCATTATTCAGGTTATGACTTCCTTTCCTATCCCTGGGGGTGTTCTAACATCACCTCTACATGGAAGTTTGCTTTACTTGACAAAAAATGAAAAAGTTATTGGAGACAGCAGATATATGTCTTCTCTTAATGGTCATCAAGAACCTTGTTCCTTGTCTACTGATGAATCAGATTCTTTTGTTGGGGATGGGCATTTGAAGAAGAAGACAGTGAGAATAGTGAGACAAAGTGAAAAGCGGTTGGAATTGAAGCATATGAATGTTACCCTTTCTGAGAATGGTATGACATTGCCTACAAAGAAAAGGTTAGGAAATAGAACACCAGACCGTAAGGACTTTTTCTCTAATGACTTGAAATGGACGCCTCTGTCAAGTTCAATCTGTGATGCTAGTGAAACTGCCGAAATCACTGCTAAAGCTTCTGAAGTCTTCAAGGAGGCTAATGTGAGCAGGGTGCAAGGAAGAATGGTTTCTGTTGAAGCATTAAAGGAGGAGTCGTTGGGGTCGATATCTGGTCAGGATTTTGAGAAGATTGATAAGCAAAATGCAGGAAATGGTTTTATGAAAAGTGATTTAGAATCTAAGCTGGAGAATTCCCACAAAGATAATTCTACTGGTCCTAAGAATAATGATAGGTGTAATACTTACATGATTTCCAAAATGGCTGAGCATGATGCAGTAAAATGTAAGATAGATAAAAAGTCTGAGACCCATCAGAATGTAAAGACTACATTTGAGGGGAAGAATAAGTCAAAAGGTGATCAGAGTCCTGACAAAGCCGAGGCTGTTGCAAGAAAAGATAGCTTTGGTGGCACTAATAATGCAATGGTATCTGATACTGGGAGTGCTGGCTTTGGCATTACTAGTAGAAGTAAAATAAATAAAACAAAGTCACTGAAGAATAATAAGGTCAGAGATAGTGATAAAGATTCATTGAAAGAAAAAAAATCACAACAGAAAGTTGATGGTCCTCCTGGTAGTAGCGCCATAAAAAATGCTAACATTAATAATGAAAAACAGAGTGCATTTGGGGCTAAAGTAAAGGAAAGACCAGGTGGCAACAAAGTGGTTAACCAGTTTCCAGCTGTGCCATCAATAAAAGATGCTTCAGGTTCATTTCCTATGGCTGAAAATAAACCTGCTTCTGAGGTGATTCCATCAGCAGTAGCAGCACCTCAACTTATTGCTGAAGATTGGGTATGTTGTGACAGTTGCCAACAGTGGCGGCTTCTACCTACTGGTTTAAAGCCAGATCAGCTTCCAGAGAAATGGTTGTGTAGCATGTTAAATTGGCTGCCTGGGATGAATTCTTGTGACTTTAGTGAAGATGAGACAACTAAGGCACTTTACGCCTTATATCAGATGCCAATGTCTGAGGGTCAAAATAACTTGCAAACCCATGCCACTGAAACTGCAATTGGAGTGAGCTCTGCTGATGCTTTGCAATTTGGCCTGAATCACAAAATGACCAGCTCTGATGTATTGTCTGATCGAGGGAAGAAGAAACATGTTATTAAGGAAAAAACAATGTTAGGAATCAATAATGACATGCTTCAATGCTCAAACTCTGCAAAGATCAACACTCATAAAAGCTTGAATGACATGAATCAGCATGCTGCAAACTCAAATCCAATGAAGAAGTTGAGCTCTAAACATTTGCCTAAGGAGAAAGAAAAACAAATAAATGGAGATGACAGAAAGCATATTAAATTGAAACGTAAGATGGATGCTGATCATTTTAGATCAGGAACTCCTAAGAAAGCAAAAACTGAAAATGTTTGCTATGTTGATAAACAATCGAATCCTGGCATGAACCTTGAGAATGTGGCTCTAAATTCAAGAAATGGTTTGCCAACAATAGCTAGTGGGAAGGATATGAGAGAGTATGATGAGTATTGTTCATCTGAGGATGTACAGGACAGATTACTAGTCCCTGTAAAAAAGGAGGGAGATAAGGCCCAGGTCTCATCTGGTTGTGGGTCCTTGGATATGAAGAACAGTAGCAATGATTTGAGGAAAAAAAGGAAATTGAAGGATTGGCTGGATAATGAGAAGCAGAACAGCTCATATGCCATGCATGGTGATCAGCAGGGGGGTGAAGAGGGAAATGCAAATAAATTTAGGAAGGAAAAGAAGTGTAAAATTTTGAATGAAGAGGCAAAATCAGTAACTGATGGTGATAATAAATTGAGTAAAGGTGGGATGAGACAAGTTTGCTTATCAGGCAGTAGGGACCAAACAGCTGTTGGGGCAGTAGTTAGATATGTTGATAAGGGCCACCAGCCAAGGAAGCACAGAAAAAGTATTGCATCTCATCAAGCTTCAGATGGTATTGATCCATTGAGCAAGGACTTGGGCACTGGACAACTTTCATTGGCAGCAACTTCTAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAAAACTAACTTTGATGATGTGAAAGGTTCACCTGTGGAATCTGTTACCTCGTCACCTTTGAGGGCATCTAACTTGGAAAAGCGTAGTTTGGCAGTAGGAGACATTTCAGTGAAGGATGGTGCTACAAAAGGTGGTCTCTCTTCAATAGGTCCCAGGAGAGGTGCAGATAAACAGGAGGGAAAGTTATCAGTAAAATTGAAGGACAGAATTTCATATAACTTACATCCTGCACCCCACAAATTATCTTCAATAGAGAATCGGGTTGAGGATGCTAAAGACAAAGCCAGGGTCCAAGCTAAAACTTCTTCTGAAGCTAAGAATAACCATTTGCTTGAAGGTGGTATTCCTGCTGAACATGGCAATTGTGCCAATGGCATGCATCATGAGGAAAAATTAGACAAGGACAACCTGGAAAGTGAACTTTCTTGGCAGAAATCTGATAAGGTTACATCATTTCACAGCATGGAAAATAACAGGTCTGGTTCTCAGGTTGGTACAGATAAGACGAAGGTTTCAGCTTCAGAGATTTGTTATTCCAAAAATGGTGGGAGGTATGAATCTTCAGCTGACCCTTGTTATCATGCACCTGGTTCTGAGACAAGGAATGATGCTAAATACTGTTCTAAGCCTAGACGTGAGGTTGGCAATATCAGCCAGAAGAGTGCTTTAAGACATGGGTCTAATGAAACTGGAAAGCAAACTGAGCTAAAACAAAAAGACACTGAGAATTCAGTTCTGAGGATGGATACTCAATGTAGTACTGACAGAAAGACTATCTCCCAGCAGAACTTGACTCAGGATGTTGAGGAAGAAAACAAAGGTGATGTATGCACAGAATCAAGAGATGGGAAATCCAAAGTTCTCTCATCTGCTGTGGGTGAAATAAAAAGGGAAACATTAAATGTGAGTTCTAGAAATGTACCTCAGCGTCGAAAGGGAGATATGTCAAATGAACATCCAGTCCATGTGTCTGGCAATGGTGATATGGCCAAGTTAATGCGAAATTCTGCTGTCATTAATAGCAACGTTTTAGTTAATAATAGTTCTGGAAATTTTGCACCTAACCAACGACCCACCATGTCAAGTCCTGTAAAGACAAATTCTAGCCAAACTGCTGTTGAAACCCTGGAAGAAGCCACAAAACTAAAAGATAGAGCAGATCAGTATAAGAGCTCTGGGTTTGATTTTGAAAGCAATGAAACATACTTTCAAGCTGGTTTGAAGTTTCTGCATGGAGCATCTCTTTTAGAAAATTGTCACACTGAGAGTAGCAAGCATGGGGAGATGAGTCAAATGCAAATTTACGCTACTGCAGCAAAACTTTTCAAATCCTGTGCCCATGAATATGAAAGTCACCAAGAAATGGCAGCAGCTGCTTTGGCATATAAATGCATGGAGGTGGCATACATGAGAGTGGTTTTCTGTAAACATTCTAGCACAAACAGAGATCGACATGAATTGCAATCAACTCTTCAAATGGTTTCTCAAGGTGAATCTCCTTCATCTTCAGCATCCGATGTTGATAACTTAAATAATCAAGTGGCAATGGATAAGGCTACTTTGCTCAAGGGTGCTAATGCTCATGCTGCTGGTAACCAAGTCATATCTGCTCGAACTCGTCCAAGTTTGGTCAGGCTTCTTGATTTTACTCAGGATATAAATTTTGCAATGGAGGCTTCTAGAAAATGTCAGATAACTTTCAAGGCTGCTAATGTGATCATGGAAGAAGCAAGGAATAGGGACTGTATAACTTCCATTAGGAGCGTTATTGATTTCAGCTTCCAGGATGTAGATGAGCTTGTATGTCTGGTTTGGACTGCAACAAAAGCCATAAGTCGTGCTGGTCTTGGTGGTGCTAGAGATTAA 4965 0.4022 MEENTEFEEGEACYYKDDDEGNIDLDSLSYIDERIQHLLGHFQKDFEGGFSAENLGAKFGGYGSFLPTYERSPRILSHPKTPQRNHSSPKSPTNLHKEAVSHNRNAPSNMPPCARLGNASYSHSSHDLRATSVDDPVKKDRGISSNDVAGRCILKDDSTTKTGNPTDQRTLKFRIKVKSNILAQKNAEIYSGLGLDNSPSSSLGNSPVESEGMPPVSQENAEDSPAGIIQVMTSFPIPGGVLTSPLHGSLLYLTKNEKVIGDSRYMSSLNGHQEPCSLSTDESDSFVGDGHLKKKTVRIVRQSEKRLELKHMNVTLSENGMTLPTKKRLGNRTPDRKDFFSNDLKWTPLSSSICDASETAEITAKASEVFKEANVSRVQGRMVSVEALKEESLGSISGQDFEKIDKQNAGNGFMKSDLESKLENSHKDNSTGPKNNDRCNTYMISKMAEHDAVKCKIDKKSETHQNVKTTFEGKNKSKGDQSPDKAEAVARKDSFGGTNNAMVSDTGSAGFGITSRSKINKTKSLKNNKVRDSDKDSLKEKKSQQKVDGPPGSSAIKNANINNEKQSAFGAKVKERPGGNKVVNQFPAVPSIKDASGSFPMAENKPASEVIPSAVAAPQLIAEDWVCCDSCQQWRLLPTGLKPDQLPEKWLCSMLNWLPGMNSCDFSEDETTKALYALYQMPMSEGQNNLQTHATETAIGVSSADALQFGLNHKMTSSDVLSDRGKKKHVIKEKTMLGINNDMLQCSNSAKINTHKSLNDMNQHAANSNPMKKLSSKHLPKEKEKQINGDDRKHIKLKRKMDADHFRSGTPKKAKTENVCYVDKQSNPGMNLENVALNSRNGLPTIASGKDMREYDEYCSSEDVQDRLLVPVKKEGDKAQVSSGCGSLDMKNSSNDLRKKRKLKDWLDNEKQNSSYAMHGDQQGGEEGNANKFRKEKKCKILNEEAKSVTDGDNKLSKGGMRQVCLSGSRDQTAVGAVVRYVDKGHQPRKHRKSIASHQASDGIDPLSKDLGTGQLSLAATSSSSKVSGSHKAKTNFDDVKGSPVESVTSSPLRASNLEKRSLAVGDISVKDGATKGGLSSIGPRRGADKQEGKLSVKLKDRISYNLHPAPHKLSSIENRVEDAKDKARVQAKTSSEAKNNHLLEGGIPAEHGNCANGMHHEEKLDKDNLESELSWQKSDKVTSFHSMENNRSGSQVGTDKTKVSASEICYSKNGGRYESSADPCYHAPGSETRNDAKYCSKPRREVGNISQKSALRHGSNETGKQTELKQKDTENSVLRMDTQCSTDRKTISQQNLTQDVEEENKGDVCTESRDGKSKVLSSAVGEIKRETLNVSSRNVPQRRKGDMSNEHPVHVSGNGDMAKLMRNSAVINSNVLVNNSSGNFAPNQRPTMSSPVKTNSSQTAVETLEEATKLKDRADQYKSSGFDFESNETYFQAGLKFLHGASLLENCHTESSKHGEMSQMQIYATAAKLFKSCAHEYESHQEMAAAALAYKCMEVAYMRVVFCKHSSTNRDRHELQSTLQMVSQGESPSSSASDVDNLNNQVAMDKATLLKGANAHAAGNQVISARTRPSLVRLLDFTQDINFAMEASRKCQITFKAANVIMEEARNRDCITSIRSVIDFSFQDVDELVCLVWTATKAISRAGLGGARD. 1655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1382 1402 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 419 433 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 462 564 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 879 904 - -
Seca6g03959 1654 Gene3D - 620 674 - -
Seca6g03959 1654 ProSiteProfiles Zinc finger CW-type profile. 619 672 IPR011124 GO:0008270
Seca6g03959 1654 MobiDBLite consensus disorder prediction 462 491 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1244 1269 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 419 439 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 195 213 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1073 1094 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1021 1053 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1301 1315 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 73 144 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1335 1355 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 525 546 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 497 521 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 1299 1318 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 547 564 - -
Seca6g03959 1654 PANTHER CW-TYPE ZINC FINGER 1 1646 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 128 144 - -
Seca6g03959 1654 Pfam CW-type Zinc Finger 625 670 IPR011124 GO:0008270
Seca6g03959 1654 MobiDBLite consensus disorder prediction 983 1009 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 761 788 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 195 221 - -
Seca6g03959 1654 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03959 Seca-Chr6 107303089 107313002 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03959 - - gmx:102667636 2290.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00304 12 2765884 2774854 Seca6g03959 6 107303089 107313002 PCT