Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00304 ATGCAAGGCAATATTGAGTTCGAGGAAGGAGAGGCTTGCTATTATAAGGATGATGAAGACGACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCGTGTTCTGGGCCATTTTCAAAAGGACTTTGAAGGTGGTGTTTCTGCTGAGCACTTGGGTCCAAAATTTGGTGACTATGGCTCCTTTCTACCTACCTGTGAACGCTCTCCTCCTCTTCGATCTCATCCGAAGACTCCACAAAGACACTTCAGTTCACCAAAATCTCCTAACAATCTCCACACTGAGGCTGCATTTCTTAACTCAAAAGCACCTTTAAATAAGCCTTCTTTTTTGAGGCTTGGAACTGCTTCCCATAATGCTCCTCCATTTCACAATTTAAGAGCACCATCAGTAGGTTGTTCAACAAAGAAGGACACAGGAATTTCTTCCAATGCAGAAATGGAGAAGTGCACTTTGAAAGACGATCATGCAAATAAGTCAGAAAAATTCACTGATCAGAGACCACTAAAGTTGCGAATCAAAGTGAAATCAGATATCTTAGCAAAAAGGAATGCAGCAATTTATAGTGGACTTGGACTTGATGACTCTCCATCTTCATCAATGGGGAACAGCCCTGAGGAAAGTGAAGTCATGCCACCTGTATCCCAAGAGACCCCTGAAGAATCTCCAATTGACATTGTTCAGGTTATGACTTCCTGCACTATCCCTGGGGGTATGCTAATATCACCTCTACATAACAGTCTACTCTGCTTGATAAGAAAGGAAAAAGTTCTTGGAGACAGCAGACCTACATCTTCTCTTAATGGTCATCAAGAACATTGTTCCATATCTACGGATGAATCAGATTCTTTTGTGGGGGATGGACATTTGTTGAAGAAGAGGAAAGTGAGAATGGTGTGCCAAAGTGAAAAACAGTATATGAATGGTATCTGTTCTGAGAATGATATGATATTGCATAAGAAGAAAAGATTAGAAAATAGAACTCCAGATTGTAAGGACTTGCTCTCTAATGACTTGAAATGCACACCTCTTTCAAGTTCAATTTGTGATGCTGGTGAAACTGCTGAAGTTACTGGTAAGGTTTTTGAAGTGTCCAAGGAGGTGGTCAATAAAGATGGAGTGGAATGCAGAACAGGCTCCCTTGAAGCTGTGAAGGAGGATTCACTGGAGTCAATATCTGGTCGGGATTTTGACAAGACTGAGAAGCAAAATACAGGAAATAGCTTTTCAAAAAAAGTTTTCGAGCATAAACCAGAATTTTGCCAGAAGAATAATTCTACTGATCCTAAGAATAATGGCAAGTATAATGCTTTCATGATTTCAAAAAAGGATGAGCGTGATACAGTAAAATATAATTTGGATCAAGATACCCAAAAGCATGAGACTGACCAGAAAGGAAAGGCAAAATTCGAGGGCAAGAAGAAGTCGAAAGGTGAACCAAGTCCTGGAAAAGCTATGACTGCGTCAGGAAAAGATAGCATTGGGTATACTAATAATGCCATGGTAACTGATAAAAATAGTGCTGGTGTTGGTGTTACTGGTAAACATAAAATGCTCAAAATAAAGTCATTGAAGGATAATAAGGTCAGAGATTCGTTGAAAGAAAAAAATTCAGAACGGAAAGTTGATGGAATAGATCGAGCTAGTGGTCCTCCTGTTAATAAGGCTAAAATAAATGTTAACCTTGATAACATTGAAGGAAAGAGTGCATATAGGGTTAAAGTAAAGGGAGTAGCAAGTGACAATAAAATTGTTAATCAGTTGTTAACTGGGCCATGTGCAAAAGATGCTCCTGGTGCGTTTCCTATTGCTGAAAATAACCCTATTTCTGAGATGGTTCCACCACCAGCACCTCAACTTATCGAAGAAGATTGGGTATGTTGTGACAATTGCCAGAAATGGCGGCTTCTACCTATAGGTTTAAAGCCAGAGCAACTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGATGTAACATCAGTGAGGAGGAAACAACAAAAGCACTTTATGCTTTATATCAAATGCCAATTTCTGAGGGTCAAATTAACACGCAGAGCCATCCCATTGGACCTGAAACTGGATTGAGCTCTGCTGATGCTCTACAATTTGGCCTGAATCACAAAAAGTCCAGTTCTGATGTAATGTCTGATCGAGGAAAGAAGAAACATGGTATTAAGGAAAAGACAAAGTTAGGAATCAGTAGTAACATGCATCAGTTGTCAAATACAGCAAAGATCAATGCCCGAGAATCTGGAAAAAATAGAAGCTCGGTTGATGTGAATCAGCAGCCCACAGACTCAAATCATATGAAGAAATCTAATTCTAAACATTTGAACAGGTTGAACAATTCGATAGAAGAGAAAAACATACCTAAAGAGAAAGAAAAGCAAATTAGTGGAGGTGGCAGAAATCATGTTAAATTGAAATGTAAGATGGAGGCTAATCAATATATATCAGGAACCCCTAAGAAATCTATGACTGAAGATGTTTGCTATGCTGATAAACAACTGAATCCTGACATGGACTTTGAGAAGGTGGGTCTAAATTCAAGGTATGGTTTGCCAACAAAAGGTAGTGTGAAGAATATGAGGGAATGTGATGAGTATTGCTTATCTGAAGATCTACAGAATAGGTCAGTAGTTCCTATAAAGAAAGGAAACCAGACACCATTCTCATCAGATGCTGGGTCATTGGATATAATGAACAGCAGTAAAAATGGTTCAATTAAGAAAAGGAAATTGAATGACTGGCTGGATAATGAGAAGCACAACACATTGTCTGTGGTAGGTGATATTCAATATGGTGAAGAGAGCAGTGTGAGTGGATTTAGGAAGGAAAAGAAATGTAGAGTTTTGAATACTGAGCCAAAATCAGTAACTCAAAGTGATGATAAATTGAGTAGAAAAGGTGGGATGAAGCAAGTTTTCTTGTCAGACAGCAGGGACCAAACAGCTGTTGGGACAGAGGTGAAAAGTGTTGATAAGGTCCAACAGCCAAGGAAGCTGAGAAAAAATGTTGCTTCTTACGAAGCTTTGGATTATTTCGATCCATTGGGCAAGGATTTGGACTCTGGACAACTTCCATTGGCAGCAAATTCAAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAGAAACAACCTTGAAGATGTGAGAGGCTCTCCAGTAGAATCTGTTACCTCATCACCTTTGAGGACCTCCAATTGGGACAAGCGTATTTTGGCAGCAGGGAACATGACAGGGAAAGATGATTCTAGAAAAGGTGGTCTCTCTTCAATGAGTTACAGAAAAAGTTTGGATAATAGGGAGGGAAAGATATCAGTAACAATGAAGGGGAAAGTTTTGTCTGACCTACCTGCACAGCATGGTAATTGTGGCAATGGTTCACATCATGAGGAGAAAATGAAAAAGAATAATCAAGAAAATGCACTTTCTTGGCAGAAATCTGGTAAGGTTACATCATTACGGGTTAAGGAAAAGGACAGGAGGTCAGGTTCTGAGGTTAGCAGGGATAAGATGAAGGTTTCAACTTCAGAGAACTCTATTTCCAAGAATGGTGTGAATTATGAGTTAGCAGTTAATCCTAGCTATCATGCTTCTGATACTGAGACAAGAAACGATGCTAAAAACAGTTCTCCTGAGTCTAGGCACAAGAATGCTGACAACCTTAATAAGAAAAATTCTTTGAGGCATTGGTCAAGTGAATCTGGAAAGCCAACTGTGGTAAAACAAAAAGATTTCGAAAGTTCAGTTCTGAAAGCGGATGCTCCGTATAGCATTAGTAGAAAGATTATCTCCCAGCAGAACCCGATTCATAAGTTTGAGGAAGAAAACAAAGCTAATCAGGTAGGCAATGAATCAAGAGATGGGAAAGCCAAAGTTCTCTTATCTTCAGAGGACAAAGCAAAAAGGGAAACATCATATGTGGGTTCTAGAACTGCACCAGAGTCTCAAAAGGGAGATAATTCTGCTGATGTTAATTGCAAAGTGGGAGTTAATTGGCGTTCAGGACATTTTGCACCTGATGGACAACTCAGTGAGTCAAGTCCTGTGACAACAAATTCTAGCAAAACTGCCTTTAGCATTCTGGAAGAAGCCACAAAGCTAAAAGATTCTGCAGATCGTTATAAGAACTCTGGGTTTGAGTTTGAAAGTAACGAAACTTATTTTAAAGCTGCCTTGAAGTTTCTGCATGGAGCATCACTTCTGGAAAATTGTCAAAGCGAGAGAAGCAAGCATGGAGAGATGAATCAAATACATTTATATGCCACTACAGCTAAACTTTTTGAATCCTGCGCTCATAACTATGACAAACGCCGAGAAATGGCCACAGCTGCTTTGGCGTATAAATGCATGGAGGTGGCATACATGAGGCTGGTTTACTGTAAACATTCTAGCATAAACAGGGATCGGCATGAGTTGCAATCAACTTTACAAATGGTTTCTCAAGGCGAATCTCCTTCATCTTCTGCATCTGATATTGATAACTTAAACAATATGGTGGCTGTGGACAAGTCTACTTTGCCAAGGAGTACTAATACTCATGTTGCTAATAATCAAGTCATATCTGCTCGAAATCACCCAACTCTTGTCAGGCTTCTTGATTTTACTCAGGACATGAATTTTGCAATGGATGCTTCTAGAAAATGCCAGAGCACTTTCATGGCTGCTAATTTGATCATGGAAGAGGCACAGAATAGCGATTGTATAACTTCTATTAGGAATGTTATTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATCTGGTTTTGATTGCAACAAAAGCAATAACTCGTGCTGGTCTTGGTGGTGCTAGAGATTAA 4851 0.3952 MQGNIEFEEGEACYYKDDEDDIDLDSLSYIDERIQRVLGHFQKDFEGGVSAEHLGPKFGDYGSFLPTCERSPPLRSHPKTPQRHFSSPKSPNNLHTEAAFLNSKAPLNKPSFLRLGTASHNAPPFHNLRAPSVGCSTKKDTGISSNAEMEKCTLKDDHANKSEKFTDQRPLKLRIKVKSDILAKRNAAIYSGLGLDDSPSSSMGNSPEESEVMPPVSQETPEESPIDIVQVMTSCTIPGGMLISPLHNSLLCLIRKEKVLGDSRPTSSLNGHQEHCSISTDESDSFVGDGHLLKKRKVRMVCQSEKQYMNGICSENDMILHKKKRLENRTPDCKDLLSNDLKCTPLSSSICDAGETAEVTGKVFEVSKEVVNKDGVECRTGSLEAVKEDSLESISGRDFDKTEKQNTGNSFSKKVFEHKPEFCQKNNSTDPKNNGKYNAFMISKKDERDTVKYNLDQDTQKHETDQKGKAKFEGKKKSKGEPSPGKAMTASGKDSIGYTNNAMVTDKNSAGVGVTGKHKMLKIKSLKDNKVRDSLKEKNSERKVDGIDRASGPPVNKAKINVNLDNIEGKSAYRVKVKGVASDNKIVNQLLTGPCAKDAPGAFPIAENNPISEMVPPPAPQLIEEDWVCCDNCQKWRLLPIGLKPEQLPEKWLCSMLYWLPGMNRCNISEEETTKALYALYQMPISEGQINTQSHPIGPETGLSSADALQFGLNHKKSSSDVMSDRGKKKHGIKEKTKLGISSNMHQLSNTAKINARESGKNRSSVDVNQQPTDSNHMKKSNSKHLNRLNNSIEEKNIPKEKEKQISGGGRNHVKLKCKMEANQYISGTPKKSMTEDVCYADKQLNPDMDFEKVGLNSRYGLPTKGSVKNMRECDEYCLSEDLQNRSVVPIKKGNQTPFSSDAGSLDIMNSSKNGSIKKRKLNDWLDNEKHNTLSVVGDIQYGEESSVSGFRKEKKCRVLNTEPKSVTQSDDKLSRKGGMKQVFLSDSRDQTAVGTEVKSVDKVQQPRKLRKNVASYEALDYFDPLGKDLDSGQLPLAANSSSSKVSGSHKARNNLEDVRGSPVESVTSSPLRTSNWDKRILAAGNMTGKDDSRKGGLSSMSYRKSLDNREGKISVTMKGKVLSDLPAQHGNCGNGSHHEEKMKKNNQENALSWQKSGKVTSLRVKEKDRRSGSEVSRDKMKVSTSENSISKNGVNYELAVNPSYHASDTETRNDAKNSSPESRHKNADNLNKKNSLRHWSSESGKPTVVKQKDFESSVLKADAPYSISRKIISQQNPIHKFEEENKANQVGNESRDGKAKVLLSSEDKAKRETSYVGSRTAPESQKGDNSADVNCKVGVNWRSGHFAPDGQLSESSPVTTNSSKTAFSILEEATKLKDSADRYKNSGFEFESNETYFKAALKFLHGASLLENCQSERSKHGEMNQIHLYATTAKLFESCAHNYDKRREMATAALAYKCMEVAYMRLVYCKHSSINRDRHELQSTLQMVSQGESPSSSASDIDNLNNMVAVDKSTLPRSTNTHVANNQVISARNHPTLVRLLDFTQDMNFAMDASRKCQSTFMAANLIMEEAQNSDCITSIRNVIDFSFQDVDELVHLVLIATKAITRAGLGGARD. 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1210 1233 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 532 548 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1039 1072 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 967 992 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1234 1248 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1161 1182 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 69 94 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 195 213 - -
Seca12g00304 1616 ProSiteProfiles Zinc finger CW-type profile. 621 674 IPR011124 GO:0008270
Seca12g00304 1616 MobiDBLite consensus disorder prediction 754 777 - -
Seca12g00304 1616 PANTHER CW-TYPE ZINC FINGER 1 1608 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1085 1251 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 455 482 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 80 94 - -
Seca12g00304 1616 Gene3D - 622 676 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1183 1209 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1279 1334 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1279 1315 - -
Seca12g00304 1616 Pfam CW-type Zinc Finger 627 672 IPR011124 GO:0008270
Seca12g00304 1616 MobiDBLite consensus disorder prediction 532 552 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 1318 1332 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 789 809 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 754 809 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 455 494 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 193 223 - -
Seca12g00304 1616 MobiDBLite consensus disorder prediction 716 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00304 Seca-Chr12 2765884 2774854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00304 - - gmx:100793863 2145.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00304 12 2765884 2774854 Seca12g00304 12 2765884 2774854 ECH
Seca12g00304 12 2765884 2774854 Seca6g03959 6 107303089 107313002 PCT