Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03850 ATGAATAGCGAAAAGGATAAAACTGCTCCTTCTCTTTCACCTCCATCTTCACCTTTACCTTCTTATACCTTATCCAAGGGCATCAATGGCCTCGACAAGGTTCTTCTCCGCGAGTCTCGTGGTTCCTCCGCCGAGGTTTACCTGTACGGTGGTCACGTGACTTCTTGGAAGAACGACCATGGCGAGGAATTGCTTTTTCTCAGTAGTAAGGCTACATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCAATATGCTTTCCACAATTTGGAAGCCTTGGCACCCTTGACTCACATGGATTTGCTAGAAATCGGTTTTGGACCGTTGATAAGGACCCTCCTCCATTTCCAACAAATACTTTGAACAAAGCCTTTGTTGATTTGATTCTTAAGTCTTCTGATGATGATGACATGAAGATTTGGCCTCACAGTTTTGAGTTCCGTCTTAGGGTAGCTTTGGGACCCGGAGGAGATCTGATGTTGACATCTCGGATTAGGAACACAAACAGTGACGGGAAGCCATTTTCATTCACCTTTGCTTATCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGGGTAGAGGGATTAGAGACCCTGGATTATCTTGACAACTTGCAGAGCAAGGAACGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCAGAAGTTGACAAGATATATCTTAGCACTCCCACAAAGATTGCAATTATTGATCATGAGAAAAAGAGGACATTTGTTTTGCGTAAAGATGGCCTTCCTGATGCTGGTGAGTATAATCAGGTTCATCTTACTCATATTGTCCTTCATAGACATGTAAATATACAAGAACGGATGAGCAAGCACCATCTCTGGTTCAAGCTAGGAATGACATTTTCCAAATCTTGCTTGAATACCTCTGGATGTCTTAATTGGGGATGTTTGAGCTTGGGCTGTAATCTAAGTCATGTGGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATGGCTGATTTTGGTGATGATGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATCACTTTGAAACCTGGAGAAGAATGGAAAGGAAGACTAGAGCTTTCAGCTGTTCCCTCTAGTTATTGTAGTGGGCAGCTTGATCCCCAGAGAGTTCTTCAGGGAAGCTGA 1173 0.4288 MNSEKDKTAPSLSPPSSPLPSYTLSKGINGLDKVLLRESRGSSAEVYLYGGHVTSWKNDHGEELLFLSSKATFKPPKAIRGGIPICFPQFGSLGTLDSHGFARNRFWTVDKDPPPFPTNTLNKAFVDLILKSSDDDDMKIWPHSFEFRLRVALGPGGDLMLTSRIRNTNSDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQSKERFTEQGDALTFESEVDKIYLSTPTKIAIIDHEKKRTFVLRKDGLPDAGEYNQVHLTHIVLHRHVNIQERMSKHHLWFKLGMTFSKSCLNTSGCLNWGCLSLGCNLSHVVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPQRVLQGS. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03850 390 Pfam Aldose 1-epimerase 318 369 IPR008183 GO:0005975|GO:0016853
Seca6g03850 390 Pfam Aldose 1-epimerase 33 261 IPR008183 GO:0005975|GO:0016853
Seca6g03850 390 SUPERFAMILY Galactose mutarotase-like 28 263 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca6g03850 390 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 315 375 - -
Seca6g03850 390 SUPERFAMILY Galactose mutarotase-like 315 369 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca6g03850 390 Gene3D - 311 376 IPR014718 GO:0030246
Seca6g03850 390 Gene3D - 29 268 IPR014718 GO:0030246
Seca6g03850 390 CDD D-hex-6-P-epi_like 38 370 IPR025532 -
Seca6g03850 390 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03850 Seca-Chr6 106051201 106057514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03850 K01792 - zof:122006681 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00768 12 7077739 7084917 Seca6g03850 6 106051201 106057514 PCT