Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00768 ATGAGTAGCGAAAAGACACCTTCATCAGCTTCCTCTTCGAGTAGCTACGAGTTGTGCAAGGGCTTCAATGGCCTCGAGAAGGTTCTTCTTCGCGATGCTCGTGGTAGCTCCGCCGAGGTGTACTTATACGGTGGTCATGTGACTTCTTGGAAGAATGACCATGGCGAGGAATTGCTTTTTCTCAGTAGTAAGGCTACATTTAAGCCTCCAAAGGCTATTCGTGGAGGGATTCCAATATGCTTTCCTCAATTTGGAAGCCACGGTACCCTTGAGCAGCATGGATTTGCTAGAAACCGGCTCTGGACCATTGATGATGACCCTCCTCCTTTTCCAACAAATACTTTGAATAAAGCCTTTGTTGATTTGATTCTTAAACCCTCAGAAGATGACATGAAGATTTGGCCTCATAGTTTTGAGTTTCGTCATAGGTTAGCTTTGGGTCCTGGAGGAGATTTGATGTTGACATCTCGGATTAGGAACACAAACATTGAAGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTTTCTGTGTCAGATATAAGTGAGGTTCGGGTAGAGGGATTAGAGACAATGGATTATCTTGACAACTTGCAGAAAAAGGAACGCTTTACTGAACAGGGGGATGCTTTAACATTTGAATCAGAAGTTGACAAGATATATCTCAGTACTCCTACAAAGATTGCAATTCTTGATCATGAGAAAAAGAGAACATTTGTATTACGTAAAGATGGTCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATGGCTGATTTTGGTGATGATGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATCACTTTGAAACCAGGCGAAGAATGGAAAGGAAGACTAGAACTTTCAACTGTTTCTTCTAGTTATTGTAGTGGGCAGCTTGATCCCCAGAGAGTTCTTCAAGGAAGCTGA 969 0.4211 MSSEKTPSSASSSSSYELCKGFNGLEKVLLRDARGSSAEVYLYGGHVTSWKNDHGEELLFLSSKATFKPPKAIRGGIPICFPQFGSHGTLEQHGFARNRLWTIDDDPPPFPTNTLNKAFVDLILKPSEDDMKIWPHSFEFRHRLALGPGGDLMLTSRIRNTNIEGKPFSFTFAYHTYFSVSDISEVRVEGLETMDYLDNLQKKERFTEQGDALTFESEVDKIYLSTPTKIAILDHEKKRTFVLRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSTVSSSYCSGQLDPQRVLQGS. 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00768 322 FunFam Glucose-6-phosphate 1-epimerase 23 308 - -
Seca12g00768 322 Pfam Aldose 1-epimerase 27 301 IPR008183 GO:0005975|GO:0016853
Seca12g00768 322 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 19 306 - -
Seca12g00768 322 CDD D-hex-6-P-epi_like 32 302 IPR025532 -
Seca12g00768 322 Gene3D - 23 309 IPR014718 GO:0030246
Seca12g00768 322 SUPERFAMILY Galactose mutarotase-like 21 301 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca12g00768 322 PIRSF PHexose_mutarotase 7 309 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00768 Seca-Chr12 7077739 7084917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00768 K01792 - gmx:100809080 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00768 12 7077739 7084917 Seca6g03850 6 106051201 106057514 PCT