Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03842 ATGGGATGTTCACAATCAAAGCTGGATGATGAAGAAGCAGTTCAGCTTTGTAAAGACAGAAAGAGGTTCATCAAACAGGCTGTTGAGCAAAGAACTCGATTTGCAACTGGACATTTAGCCTACATTGAATCTATAAAAAGAGTTTCAGCAGCTCTTCGTGATTACGTTGAAGGAGATGAGCCTCGTGAGTTCTCATTAGACACAGTCATCACCCCACCTTTCACACCTGTGAAGAAAACTGGTCCTGGTTTCATTCCCATATCAGCAAAATCCTTCACTCCAACAGCAATTGAGTTTGGAGTTGGACCAAATTCTACTTTGAAAGTGAATTACCTTAGGCCAGGTGGTAATCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCTCCTCAAAGGGTCCGGGTTGAAACGTATTCTCCAATGCAGCATTATGGCATTGATGGATTTTTTGGTATGCAATCCTCACCTGGGAATCCCTCAATTTTTGCTTACTCTCCCAATAATAGGCCTATTATGCCTCCCCCTTCACCTCAAACCTCCCAATGGGATTACTTTTGGAACCCATTTTCATCATTGGACTATTATGGTTATCCTAACCGAAGTAGCCTTGACCGGACTGCTATGGATGATGAATACAAAGGATTGAGGCAGGTCCGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACAAGAAGATTGTGTTGGGAAGAAAAATGTAGCAGAAGAAAGAACCAGAACTGATATAAACTCTTCCAAAGAAGAAGTCATTGTTGAAGATTGTGATGATGAGGAGGAAGAGGAGGATGATGATGATGATGAAGATGAGGATGAGGATGAGGATGATGAGGGGGAGGAGGAGGAGAAGGAGGAAGAAGAAGAGAGAACAAACACTGAAACTGAGCATGATGCCAAAGGTACACAAGCCCATGGTAGTACTAGTTTTGAAGTATCAAAATCTCAAAGTGCAGGTCATATTGATTCCAGCCATAGGGAAATGGCAATTGGTAAACAAGAAGCTAAGGAAGAAGCACCAGGTTTTACTGTTTATGTAAACAGAAGGCCAACAAGCATGGCAGAAGTGATTGATGATCTTGAAGCTCAATTTACAATTGTCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAGTATTTATTGACATCTAATGAACTGTCAGCATCAAAGTTGTTGAACCCAGTAGCTCTGTTCCGGTCAGCTTCTTCACGCTCTTCTTCATCAAGATTTTTAATGAATTGTTCAAGCACTAGGGAGGAAGGTAATGTGGGCTCTAAGGATCCCTCGGAGGAACATTGTATGATTGCTGGTAGTCACCAATCAACATTGGACAGATTGAATGCATGGGAGAAGAAGCTTTATGAGGAAGTCAAGTCTGGAGAACGTATCCGAATTGCATATGAGAAAAAATGCAAGCAACTAAGGAACCATGATGTAAAAGGAGAGGACCCCTTTTCAGCAGATAAAACAATGGCAGCTATTAGAGATCTAGATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGAAGAATTGAAACTCTGAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTAGTTCAAGGGCTGGAGAAGATGTGGAAAGTGATGGCAGAATGTCATCAGACACAAAAGAGAACCTTAGATGAAGCTAAGATTCTTCTAGCTGGCACTCCTTCTAAATCACATACCAGAAAACATTCTTCCATGTCAATGACTGATCCAAATAGGCTTGCTCGTTCAGCCTCTAATCTTGAATCTGAGTTAAGGAACTGGCGAAATACCTTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATGCACTTACTGGATGGCTTCTCCGATGTATGAGATCTGAGCCTAATGATGTATCAAAGTTACCATGTTCTCCTCATAGGTCCAGTGGCACTCACCCACTATTTGGACTCTGTGTTCAATGGTCAAGGCGTTTAGATGCTATACATGAAAAAGCAGTGCTTGATGGGTTGGACTTTTTTGCAGCTGGGATGGGGTCCCTCTATGCACATCAATTGAGACAAGATTCATTTGGAACAAAACAAAGCAATGGGAATATGGAATTGGTGGAAGTTGGTCAGGTGGAAGAGGAAGTTATGGCTCCAGAAAAACTAGCTGAAGTTGCTATTAAGGTACTTTGTGCTGGAATGTCTGTTGCTACTAGCTCACTTGCAGAGTTTGCTTTTGATTCTGCTGAGGGATACAGTGAAGTTGTTAAGCAATGGGAGAATGTGAAATGTCCCCCACATACTTCTAGTGAGACTTAG 2337 0.4193 MGCSQSKLDDEEAVQLCKDRKRFIKQAVEQRTRFATGHLAYIESIKRVSAALRDYVEGDEPREFSLDTVITPPFTPVKKTGPGFIPISAKSFTPTAIEFGVGPNSTLKVNYLRPGGNPAISVEERPQSPQRVRVETYSPMQHYGIDGFFGMQSSPGNPSIFAYSPNNRPIMPPPSPQTSQWDYFWNPFSSLDYYGYPNRSSLDRTAMDDEYKGLRQVREEEGIPDLEEDETEQEDCVGKKNVAEERTRTDINSSKEEVIVEDCDDEEEEEDDDDDEDEDEDEDDEGEEEEKEEEEERTNTETEHDAKGTQAHGSTSFEVSKSQSAGHIDSSHREMAIGKQEAKEEAPGFTVYVNRRPTSMAEVIDDLEAQFTIVCNAANDVSALLEAKKAQYLLTSNELSASKLLNPVALFRSASSRSSSSRFLMNCSSTREEGNVGSKDPSEEHCMIAGSHQSTLDRLNAWEKKLYEEVKSGERIRIAYEKKCKQLRNHDVKGEDPFSADKTMAAIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKSHTRKHSSMSMTDPNRLARSASNLESELRNWRNTFESWITSQRSYIHALTGWLLRCMRSEPNDVSKLPCSPHRSSGTHPLFGLCVQWSRRLDAIHEKAVLDGLDFFAAGMGSLYAHQLRQDSFGTKQSNGNMELVEVGQVEEEVMAPEKLAEVAIKVLCAGMSVATSSLAEFAFDSAEGYSEVVKQWENVKCPPHTSSET. 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03842 778 PANTHER UNCHARACTERIZED 1 765 - -
Seca6g03842 778 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Seca6g03842 778 MobiDBLite consensus disorder prediction 259 296 - -
Seca6g03842 778 MobiDBLite consensus disorder prediction 309 326 - -
Seca6g03842 778 MobiDBLite consensus disorder prediction 219 345 - -
Seca6g03842 778 Pfam Protein of unknown function (DUF632) 360 688 IPR006867 -
Seca6g03842 778 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03842 Seca-Chr6 105963174 105966655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03842 275 695 Acyl Lipid Metabolism Gene Families AT2G27090 29.325 1.20e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03842 - - gmx:100780704 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03842 6 105963174 105966655 Seca6g03842 6 105963174 105966655 ECH
Seca12g00756 12 7007728 7012399 Seca6g03842 6 105963174 105966655 PCT