Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00756 ATGGGATGTTCTCAATCAAGGTTGGATGATGAAGAGGCAGTTCAACTTTGTAAAGATAGAAAGCAATTCATCAAACAGGCTGTTGAGCAAAGAACTCTATTTGCTACTGGACATATAGCATACATCCAATCTCTGAAAAGAGTTTCAGCTGCTCTGCGTGATTACTTTGAAGGAGATGAGTCACATGAGTTCTCATTAGATTCATTCATAACCCCACCTTTCACACCTGTGAAGAAAACTAGTCCTGCCTTCATTCCCATATCATCAAAATCCTCAACCCCAATTACAATTGAGTTTGAACCCAAGACAACTTTGAAAGTGAATTACCTAAGGCCGGGTGGTAATCCAGCAATTTCAGTTGAGGAAAGGCCTCCATCACCTGAAATGGTTCGAGTTGAAACATATTCTCCCATGCACCATTTTGGCATTGATGGTTTTTTTGGTATGCAATCCTCACCTATGAATGCCTCAATTTTTGCTTATTCTCCCAATAACAGGTCCAATATCCCTCCACCTTCACCTCAATCTTCTCAATGGGATTTCTTTTGGAACCCTTTTACATCATTGGACTATTATGGTTACCCCACCAGAAGTAGCCTTGATCATACTGTTATGGATGATGAGGACAGAGGACTGGGGCAGGTCCGTGAAGAAGAAGGAATTCCAGACCTGGAAGAAGATGAAACTGAACAAGAAGATTTTGTTGGAAAGAGAAACGTAGTAGAAGAAAGAACCAAAATTGACATAAACTCCTCCAAAGAAGAAGTCACAGTTGAGGATGTTAATGAGCATGAGGAGAGAGAGGGAGAGGATGGAACAGATGCTGAAATTGAAAGTGCACATGAAATCTCAGACTCACAAGCCAATGGCAGTGAATGTATTCAGGTATCAAAAGCTCAAACTGCAGGTCATATTGAATCCAGCCATCAGGAAATGGCAGTTGGTAATCAAGAAGATAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACAGAAGGCCGACAAGCATGGTAGAAGTGATGAGGGATCTTGAAGCTCAATTCACAGTAGTATGTGATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAATATTTATCGACATCTAATGAACTTTCAGACTCATATGTCATATCTATTTGTAAATTTGAGGAATATAAATTTGAATTATATTTCTCTGCAGCATCAAAATTGTTGAATCCAATAGCTCTCTTCCGTTCAGCTTCTTCACGCTCTTCCTCATCAAGATTTTTAACGAATTCTTCAAACGCTAGGGATGAAGATTACGAAGGCACTGATGATCCATCAGAGGAACCTTGCATGGTTTCTGTCAGTCATCAGTCAACATTAGACAGGTTATATGCATGGGAGAAGAAGCTCTATGAGGAAGTCAAGTCTGGAGAACGTGTTCGAATTGCATATGAGAAGAAATGTCAACAGCTCAGGAACCATGATGTAAAAGGAGAGGAACCCTCTTCTGTGGATAAAACAAGAGCAGTCATTAGAGATTTACATACCCAGATAACAGTTTCAATACACTCAATTGAAGCTATTTCCAGTAGAATTGAAACTTTAAGAGATGAAGAGTTGCATCCCCAACTTCTTGAATTGATGCAAGGAATATCATGCTTGCTGATTCTGACATATGCAAACTACAGGCTGGCTAGGATGTGGAAAGTGATGGCAGAATGTCATGAGACACAGAAGAAAACATTAGATGAAGCTAAGATTCTTCTAGCTGGCATTGATGCCAGAAAACAGTGTGGCATGTCAATAACTGATCCACACAGGCTTGCTCGTTCAGCCTCCAATCTTGAAACTGAGTTGAGGAATTGGCGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTACATTCATGCTCTAACTGGCTGGCTTCTCCGATGTGTGAAATGTGAGCCTGATGCATCAAAATTAGTATGCTCTCCTCGAAGGTCCAGTGGCACACACCCTATGTTTGGACTTTGTGTTCAGTGGGCAAGGCGTCTAGATGCCATCCAAGAAACAGCAGTGCTTGATGACATAGATTTTTTTGCATCTGGTATAGGGTCCTTCTATACACAACATTTAGGAGAAGATTCTGGACAAAATCCAGTTGGATCAAAAGAGGCCAATGAAAATATGGAAATGGTGGAAGTTGGTCAGGTGGCAGAGGTAATGACTACTGAGAAATTGGCTGAGGTTGCTATTAAGGTACTTTGTGCTGGAATGTCAACTTCTGTGAGCTCAATGGCAGAGTTTGCTATTGATTCTGCTAAGGGATACAATGAACTTGTTAAGCAGTGGGAGAATGTGAAGTTGCAAAATACTTGTGAAACTGCAAAATAG 2364 0.4074 MGCSQSRLDDEEAVQLCKDRKQFIKQAVEQRTLFATGHIAYIQSLKRVSAALRDYFEGDESHEFSLDSFITPPFTPVKKTSPAFIPISSKSSTPITIEFEPKTTLKVNYLRPGGNPAISVEERPPSPEMVRVETYSPMHHFGIDGFFGMQSSPMNASIFAYSPNNRSNIPPPSPQSSQWDFFWNPFTSLDYYGYPTRSSLDHTVMDDEDRGLGQVREEEGIPDLEEDETEQEDFVGKRNVVEERTKIDINSSKEEVTVEDVNEHEEREGEDGTDAEIESAHEISDSQANGSECIQVSKAQTAGHIESSHQEMAVGNQEDKEETPGFTVYVNRRPTSMVEVMRDLEAQFTVVCDAANDVSALLEAKKAQYLSTSNELSDSYVISICKFEEYKFELYFSAASKLLNPIALFRSASSRSSSSRFLTNSSNARDEDYEGTDDPSEEPCMVSVSHQSTLDRLYAWEKKLYEEVKSGERVRIAYEKKCQQLRNHDVKGEEPSSVDKTRAVIRDLHTQITVSIHSIEAISSRIETLRDEELHPQLLELMQGISCLLILTYANYRLARMWKVMAECHETQKKTLDEAKILLAGIDARKQCGMSITDPHRLARSASNLETELRNWRNTFESWITSQRSYIHALTGWLLRCVKCEPDASKLVCSPRRSSGTHPMFGLCVQWARRLDAIQETAVLDDIDFFASGIGSFYTQHLGEDSGQNPVGSKEANENMEMVEVGQVAEVMTTEKLAEVAIKVLCAGMSTSVSSMAEFAIDSAKGYNELVKQWENVKLQNTCETAK. 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00756 787 MobiDBLite consensus disorder prediction 418 444 - -
Seca12g00756 787 PANTHER UNCHARACTERIZED 1 774 - -
Seca12g00756 787 Pfam Protein of unknown function (DUF632) 337 694 IPR006867 -
Seca12g00756 787 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Seca12g00756 787 MobiDBLite consensus disorder prediction 254 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00756 Seca-Chr12 7007728 7012399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00756 1 770 Acyl Lipid Metabolism Gene Families AT2G27090 29.323 3.83e-69 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00756 - - gmx:100818631 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00756 12 7007728 7012399 Seca12g00756 12 7007728 7012399 ECH
Seca12g00756 12 7007728 7012399 Seca6g03842 6 105963174 105966655 PCT