Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03828 ATGGGAGGCTGCTTTTCTTGTAGATCATCCTCCAAGACTTCCAAATCCAACAATGTTCGTTTGGTTCATCTCAGTGGTTATGTGGAGGATTTTGAGCAACCTATTTCAGTGAGCCAAGTCACTAGTGGAAATCCCCCAAGTCACTTTGTTTGTACCTCAATTCAGCTTCTTTCTTCTTGCTCAAAACCATTGAATGGAGATACTCAACTCCAACCTGGGAATGTGTACTTCATCCTACCATACTCAATACTACAAGCTGATGTTTCTCCTGTGGACTTGGCTTCCCTTGCAAAGAGGCTCACTACAATAGCCAAAACCAGTAGATGTGAGGACAAGAAGGCCCTCAAAGCTAGTCCTTTTTCAAGCCAACAAGGATTGAGCACTGTTTGGAGTTCACCTTCCAGTAGTCCTGGCAGAGTTGGAGGTGCTGAGCAAATTGGTATGACATATGGAGGAAGAAGCACTTGTAGAATGAGACCATGGAAACCTATCTTGGACACTATTAGAGAGAAGTCATTCAATCGGAGAAGTGAATCAGATTTGCAAGAAAAGTACTGA 558 0.4319 MGGCFSCRSSSKTSKSNNVRLVHLSGYVEDFEQPISVSQVTSGNPPSHFVCTSIQLLSSCSKPLNGDTQLQPGNVYFILPYSILQADVSPVDLASLAKRLTTIAKTSRCEDKKALKASPFSSQQGLSTVWSSPSSSPGRVGGAEQIGMTYGGRSTCRMRPWKPILDTIREKSFNRRSESDLQEKY. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03828 185 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 170 - -
Seca6g03828 185 Pfam PADRE domain 1 170 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03828 Seca-Chr6 105795233 105795790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03828 - - gmx:100810460 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03828 6 105795233 105795790 Seca6g03828 6 105795233 105795790 ECH
Seca12g00753 12 6898527 6899108 Seca6g03828 6 105795233 105795790 PCT