Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00753 ATGGGGGCGTGTTTATCTTGTAAATCATCCTCCACATTGAAGAATGTTCGTGTGGTTCATCTGAATGGTTATGTAGAGGATTTTGAGCAACCCATTTCAGTGACTCAAGTTATTGGCAATGGCAATCCACCAAAACACTTTGTTTGCACCTCCATTCAGCTTCTTTCCTCTTCTTCAAAATCATTGAAAGGAGATACACAACTTCAACCTGGGCAAGTGTATTTCATGCTACCATACTCAGTATTGCAAGCTGATGTTTCTCCTGTGGACTTGACTTCCCTTGCAAAGAGGCTCACTTCAATAGCCAAAACTAGGCCTAGGGAGTACAATAAGTCCCTCACAGTCACAGCTAGTCAAACAATTTGGAGTTCACCTTCCAGGAGTAGTCCTGGCAGAGTTGGAGTGGCAGAGCAAATTGGTGTGAATATGATGATGAATGGAGGACGAAGCCCTTGTAGAATTCAGCCATGGAAACCTATCTTGGATACCATCACAGAGAAGCCACTCAATAGGAGAAGTGAATCAGATTTGCAGGAAAGTAATGAATGTTTGCAAGATCTTGTATCTAGATCAGTGTATTGA 582 0.4227 MGACLSCKSSSTLKNVRVVHLNGYVEDFEQPISVTQVIGNGNPPKHFVCTSIQLLSSSSKSLKGDTQLQPGQVYFMLPYSVLQADVSPVDLTSLAKRLTSIAKTRPREYNKSLTVTASQTIWSSPSRSSPGRVGVAEQIGVNMMMNGGRSPCRIQPWKPILDTITEKPLNRRSESDLQESNECLQDLVSRSVY. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00753 193 Pfam PADRE domain 1 166 IPR025322 -
Seca12g00753 193 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00753 Seca-Chr12 6898527 6899108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00753 - - gmx:100785670 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00753 12 6898527 6899108 Seca12g00753 12 6898527 6899108 ECH
Seca12g00753 12 6898527 6899108 Seca6g03828 6 105795233 105795790 PCT