Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03790 ATGATCAAAGGTAAAGATATATATGATGTTTTGGCAGCTCTTGTGCCCCTATATGTGGCTATGACATTAGCCTATGGCTCATTCCGCTGGTGGAAGATTTTCACACCTGATCAATGCTCTGGTATAAACCGCTTTGTGGCAGTGTTTGCAGTTCCTGTGCTTTCTTTTCATTACATATCAAACAATGACCCTTATGCTATGAACTTCAAGTTAATAGTCGCTGACTCTCTTCAAAAAGTTGTGATTTTGGGTGTTCTTTTTCTTTGGAACACCTTCACAAAGTATGGTAGCCTTGATTGGACAATCACCCTCTTCTCACTTTCCACTCTGCCAAACACACTCCTTGTGGGTGTCCCTCTTTTGACAGCCATGTATGGAGATTTCACAGCCAGCCTTGTGATCCAAATTGTGGTTTTCCAAAGTGTCATATGGTACAATCTTTTGTTGTTCTTGTTTGAATACAGGGGTGCTAAGAGCCTTATTTCACAGAAATTCCCTCAGACTGCAGGGTCCATTGCCTCCTTCAGAGTTGATTCAGATGTTGGCTCTCTCAGTGGCAGGGTGCCATTGCAAGCTGATGCAGAGATGGGAGAAGATGGAAAATTTCATGTGGTGGTAAGGAATTCAGTTTCTTCATCTATGGCTTCTTCATTCAACAAGTCACATTCAACACCTGGAGGATCAAATCTTACTGGGGTTGAGATCTATTCAGTCCAATCATCCAGAGAACCAGCACTAAGAGCCTCAAGTTTTAATCAAACAGATTACTACAAAGGTATTGGCTTTGAAGACAAGATGTTAAGGAATCAAGAGAGAAGATCTTGGAGGAGCAAGAGTTGTGCAGATGAGCTTTTTAATGGGCATTTGGTTTCTTCTTACCCATCTCTAAAATCAAAGTCTTCAAGGTCTACCAATGGTGACCAAAGTAAAAGGGATATCAATGTGAGTGATGATGCACTTAATATGGGGTTACACATGTTTGTTTGGAACTCAACTGAATCACCAGCTTCTGATGTCAGCAATAGACATGCAATGAATACAATTTCCTCAGCAAACTTTGGCACCACCTATCCTTCCAAATCTGTTGATGTCCCACAAGAAAGTGTTGCTTTAAAAGCTGTTCATGAATTAATTGATATGAGTCCTAGTCCTAAAGCAAGCGGAGACAGAGAGCATGAGATTGAGGATGGAATCAAATGTCCTTTAAGCAAGTGCCAGAATGGTGTGGACAGTAAAGAAGGAATTGCAAATAAAAAGCAACAAATGCCACCAGCTAGTGTCATGACAAGGCTCATTCTCATCATGGTTTGGAGAAGGCTCATAAGAAATCCTAATACCTACGCAAGTCTTTTAGGCCTCTCATGGTCTCTCATATCATTTAGGTGGAACATCAAATTGCCATCTATTATAAATGGTTCCATTTCAATAATATCTAATACTGGACTAGGAATGGCTATGTTCAGTCTAGGCCTATTCATGGCATTACAACCCAAGATCATTGCTTGTGGAAAAACTTTAGCAACAATTTCTATGGCAATTAAGTTTTTGGTTGGTCCAGCGGTGATGGCTGCAACCTCAATAGCCATCGGTATGCGTGGAGTTCTTTTACGTGTTGCAATTGTTCAGGCTGCTATTTCTCAAGGTATTGTTCCCTTTGTATTCGCCAAAGAGTACAATCTCCATGCAGATATACTTAGTACTGCGGTTATCTTTGGAATGGCAGTTGCGTTGCCTGTAATATTACTCTACTACGTGCTTCTTGGACTCTAA 1770 0.4079 MIKGKDIYDVLAALVPLYVAMTLAYGSFRWWKIFTPDQCSGINRFVAVFAVPVLSFHYISNNDPYAMNFKLIVADSLQKVVILGVLFLWNTFTKYGSLDWTITLFSLSTLPNTLLVGVPLLTAMYGDFTASLVIQIVVFQSVIWYNLLLFLFEYRGAKSLISQKFPQTAGSIASFRVDSDVGSLSGRVPLQADAEMGEDGKFHVVVRNSVSSSMASSFNKSHSTPGGSNLTGVEIYSVQSSREPALRASSFNQTDYYKGIGFEDKMLRNQERRSWRSKSCADELFNGHLVSSYPSLKSKSSRSTNGDQSKRDINVSDDALNMGLHMFVWNSTESPASDVSNRHAMNTISSANFGTTYPSKSVDVPQESVALKAVHELIDMSPSPKASGDREHEIEDGIKCPLSKCQNGVDSKEGIANKKQQMPPASVMTRLILIMVWRRLIRNPNTYASLLGLSWSLISFRWNIKLPSIINGSISIISNTGLGMAMFSLGLFMALQPKIIACGKTLATISMAIKFLVGPAVMAATSIAIGMRGVLLRVAIVQAAISQGIVPFVFAKEYNLHADILSTAVIFGMAVALPVILLYYVLLGL. 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03790 589 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 589 - -
Seca6g03790 589 MobiDBLite consensus disorder prediction 294 310 - -
Seca6g03790 589 NCBIfam auxin efflux carrier 1 589 IPR014024 -
Seca6g03790 589 Pfam Membrane transport protein 10 584 IPR004776 GO:0016020|GO:0055085
Seca6g03790 589 MobiDBLite consensus disorder prediction 294 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03790 Seca-Chr6 105278413 105281480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03790 1 589 Organic Solute Cotransporters AT1G70940 50.693 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03790 K13947 - tcc:18589454 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03790 6 105278413 105281480 Seca6g03790 6 105278413 105281480 ECH
Seca12g00721 12 6595665 6599406 Seca6g03790 6 105278413 105281480 PCT