Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00721 ATGATTACTGGTAAGGATATTTATGATGTTTTTGCGGCTATTGTGCCCCTATATGTGGCTATGATATTAGCATATGGTTCAGTTCGGTGGTGGAAAATCTTCACACCTGATCAATGCTCTGGCATAAACCGTTTTGTTGCTGTATTTGCAGTTCCACTGCTTTCTTTCCACTTTATCTCTTCCAATGACCCTTATGCTATGAATTACCACTTCATAGCAGCTGATTCTCTTCAAAAAGTTGTCATTTTGGGTGCTCTTTTTCTATGGAACACCTTCACAAAACATGGTAGTCTTGATTGGACAATTACACTTTTCTCACTTTCCACTCTTCCAAACACACTTGTCATGGGAATCCCTCTTTTAAAGGCCATGTATGGGGACTTTTCAGGAAGTCTCATGGTCCAAATTGTGGTTTTGCAGAGTGTCATTTGGTACACTCTTATGCTTTTCATGTTTGAATATAGAGGTGCTAAGCTTCTCATCACAGAGCAGTTCCCTGAGACTGCAGGGTCCATCACTTCCTTCAGGGTTGATTCTGATGTTGTCTCACTCAATGGTAGAGAGCCACTGCAAGCTGATGCAGAGATAGGAGAAGATGGGAAACTTCATGTGGTTGTTAAGAGATCAGCAGCTTCATCTATGATATCTTCCTTCAACAAGTCCCATTTAACTTCTATGACACCTAGAGCATCAAATCTTACTGGGGTTGAGATCTATTCGGTTCAATCATCAAGAGAACCAACCCCAAGAGCTTCAAGTTTCAATCAAACAGATTTTTATGCCATGTTTGCAAGCAAAGCACCGAGTCCAAAACATGGATACACAAATAGTTTCCAGAGTAATGGTATTGGTGATGTTTACTCATTGCAATCTTCCAAAGGGGCAACACCAAGGACTTCAAATTTTGAAGAGGAGATGATGAAAATGCATAAGAAAAGGGGAGGAAGGAGCATGAGTGGTGAGCTGTTTAATGGTGGTTTGGTTTCTTCTTACCCACCTCCAAACCCCATGCTTTCAGGGTCTTCAAGTGCTGGCCAAAAAAAGAAAGATAGCAGTGGTGGTGGTGGTGGTGCACCTAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGTGCATCCCCAGTTTCTGAGGGGAATCTAAGACATGCAGTTAATAGAGCTGCCTCTACTGACTTTGGCACTATTGATCCTTCCAAGTCTGTTCCCCAAGAAACTATTGCCTCAAAAGCTGTTCATGAATTGATTGAGAATATGAGTCCAGGTCGTAGAGGGAATGGAGACAGGGAGGTTGAAATTGAGGAAGGAACTAAATTTCCCACAAGTGGGTCTCCATACACTTGCCAGAAGAAGGTGGACATGGAAGAAGGTGATGCCAAACAAAATCAACAGATGCCACCTACAAGTGTCATGACAAGGCTCATCCTCATCATGGTTTGGAGGAAACTCATAAGAAATCCTAATACCTACTCAAGTCTTTTGGGACTCACATGGTCCCTCATATCATATAGGTGGCACATCGAAATGCCCACTATTGTAAAAGGTTCCATCTCAATCTTGTCTGATGCTGGTCTGGGAATGGCTATGTTCAGTCTAGGCTTATTCATGGCATTGCAACCAAAGATCATTGCATGTGGAAAATCTGTGGCAGCATTTTCTATGGCTGTTAGGTTCTTGACAGGCCCAGCTGTGATTGCGGCAACCTCAATAGGAATTGGTATCCGTGGAGTTCTTTTACATGTTGCAATTGTTCAGGCTGCCCTCCCACAGGGTATCGTTCCCTTTGTGTTTGCCAAAGAATACAATCTCCATCCAGATATACTCAGTACTGCGGTTATATTTGGAATGCTGATCGCATTGCCCATAACGATACTCTACTATGTGCTTCTTGGACTATAA 1896 0.4246 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADSLQKVVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQADAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNGIGDVYSLQSSKGATPRTSNFEEEMMKMHKKRGGRSMSGELFNGGLVSSYPPPNPMLSGSSSAGQKKKDSSGGGGGAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTIDPSKSVPQETIASKAVHELIENMSPGRRGNGDREVEIEEGTKFPTSGSPYTCQKKVDMEEGDAKQNQQMPPTSVMTRLILIMVWRKLIRNPNTYSSLLGLTWSLISYRWHIEMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHPDILSTAVIFGMLIALPITILYYVLLGL. 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00721 631 MobiDBLite consensus disorder prediction 311 362 - -
Seca12g00721 631 Pfam Membrane transport protein 10 626 IPR004776 GO:0016020|GO:0055085
Seca12g00721 631 MobiDBLite consensus disorder prediction 334 349 - -
Seca12g00721 631 NCBIfam auxin efflux carrier 1 631 IPR014024 -
Seca12g00721 631 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00721 Seca-Chr12 6595665 6599406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00721 102 631 Organic Solute Cotransporters AT5G57090 74.457 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00721 K13947 - gmx:100305383 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00721 12 6595665 6599406 Seca12g00721 12 6595665 6599406 ECH
Seca12g00721 12 6595665 6599406 Seca6g03790 6 105278413 105281480 PCT