Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03774 ATGGTGGTGAAGAAACCACGGATTGTGATAATTGGAGCAGGAATGGCAGGCCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCAAAGGACTTGTTTGAGCTTTGTGTTGTGGAAGGTGGAACCAGAATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACCGGATTGAGATGGGTGCTACCTGGATCCATGGAATTGGAGGCAGTCCAATTCACAAAATTGCTCAAGAAACTCATTCACTGCACTCTGACCAGCCTTGGGAGTGCATGGATGGGTCCACTGCTGACCCCATCACCATTGCTGAAGGTGGTTTCCACCTTAACCCTTCCATTGTTGAGCCTGTCACAAAGCTTTTCAAGAACCTCATGGATTACTCTCAAGGGAAGTTCACTGAAAAAAGTGAACTTGACAGTCACTATAAGCTGCCTGCTAAAGCTTTCAACAAAGCTGCCTCTGGGAACCTTAGTATTGGTTCTTTTCTCAGACAAGGCCTTGATGGTTACTTGGATTCAGTGAAAGAGCAAGAGGAGCTTAAAGGGTATGGGAGCTGGAGCAGGAAGTTACTTGAAGAAGCAATCTTTGCAATGCATGAGAACACCCAGAGGACTTATACTTCAGCTGGTGATCTGGGGTCTCTAGATTATGATGCTGAAAGTGAGTACAGAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGACCATAATTGAATATTTAGCTTCTGTGCTACCACCTGGTTTAGTTCAGTTAGGTAGAAAAGTCACAAGAATTGAATGGCAACCTCAGAGAGATGATGAGAGGAAGAATATGGAAAATGGTTGTTGTTCTAGGCCTGTTAAGCTACATTTCTGTGATGGCTCCGTTATGTCTGCTGATCATGTCATTGTCACGGTTTCACTTGGAGTGTTAAAAGCTGCTATACGTGATGATGATGATTCAGGTTTGTTCTGTCCTCCTCTTCCCACTTCCAAGACTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTCCAAGTCCAACACAAGGAGGAAAAAATGAACACTCCAAAGGGTTTCCCTTCCTGCAAATGGTTTTCCATTCACCTCAATCTGAAATGAGGTACAAGAAAATACCATGGTGGATGAGGAGAACAGCTACCCTTTTTCCCATCTACAACAATTCTAGTGTCCTCTTATCTTGGTTTGCTGGGGAAGAAGCAGTGACACTTGAGTCACTCAATGATGAAGAGATCATCAATGGGGTTACATCTACAGTCTCAAGCTTTCTATCACACTCTCAGTGGCAAAAGGATTCAAGTTCACATAAATTGTGCAATGGGAATGTGAATTCTGAGGAGAGATCTTATGAAAATGAAGTGAAATTCAGTAAAGTCCTGAAGAGCAAATGGGGAACTGATCCTTTATTTTTAGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATACAATGGCAGAGCCATTGCCAAAAGATAGCAGTTGTCAACCTTGTGCTTCATCTCCACTTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCTACAACTCATGGAGCTTACTTCAGTGGTCTTAGAGAAGCCAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTCATAACAACTAG 1689 0.4281 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQETHSLHSDQPWECMDGSTADPITIAEGGFHLNPSIVEPVTKLFKNLMDYSQGKFTEKSELDSHYKLPAKAFNKAASGNLSIGSFLRQGLDGYLDSVKEQEELKGYGSWSRKLLEEAIFAMHENTQRTYTSAGDLGSLDYDAESEYRMFPGEEITIAKGYLTIIEYLASVLPPGLVQLGRKVTRIEWQPQRDDERKNMENGCCSRPVKLHFCDGSVMSADHVIVTVSLGVLKAAIRDDDDSGLFCPPLPTSKTEAISRLGFGVVNKLFMQLSPSPTQGGKNEHSKGFPFLQMVFHSPQSEMRYKKIPWWMRRTATLFPIYNNSSVLLSWFAGEEAVTLESLNDEEIINGVTSTVSSFLSHSQWQKDSSSHKLCNGNVNSEERSYENEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDSSCQPCASSPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIHNN. 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03774 562 Gene3D - 8 336 IPR036188 -
Seca6g03774 562 SUPERFAMILY FAD-linked reductases, C-terminal domain 338 488 - -
Seca6g03774 562 PANTHER FLAVIN MONOAMINE OXIDASE 6 556 - -
Seca6g03774 562 Gene3D - 468 494 - -
Seca6g03774 562 Gene3D - 94 440 - -
Seca6g03774 562 Gene3D - 495 549 IPR036188 -
Seca6g03774 562 SUPERFAMILY FAD/NAD(P)-binding domain 3 554 IPR036188 -
Seca6g03774 562 FunFam Putative polyamine oxidase 5 isoform A 495 549 - -
Seca6g03774 562 Pfam Flavin containing amine oxidoreductase 15 551 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03774 Seca-Chr6 105084852 105086540 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03774 K12259 - gmx:100783032 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03774 6 105084852 105086540 Seca6g03774 6 105084852 105086540 ECH
Seca12g00697 12 6377470 6379146 Seca6g03774 6 105084852 105086540 PCT