Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03755 ATGGCTATTTCCGATGTGCCTGAAAGTTTGGGCACCACCGCTGCTGCAGCCACCGTCCAAAGCGATTCAGATCTCAGACAGTCATCTCTGCGGCGCAGACCAAGCGCCAACTCGGCTGGGGGCTTGTTCGACGCTGAGACTGCAGCTGAAGATGCGGTCAGAGATTCAGGTTCCGATAACTCCTTGAACTGCAAGTGCAGCGAGGAGGACAAGGATCACAAGCCGGATCATACAGCCGCTGATAATGCGGTCCTCAAAGACGTCGCTGATCGAGAAACAGTCCCCGATTTCAAGTTCACTTACCGTCCCTCGGTTCCCGTTCACCGGAAAATCAAAGAGAGCCCTCTTAGCTCCGACAACATTTTCAAACAGAGTCACGCAGGACTGTTCAATCTCTGTGTAGTAGTGCTTGTTGCGGTGAACAGCAGGCTTATCATTGAAAATATAATGAAGTATGGTTGGTTGATTAAGTCTGGCTTTTGGTTTAGTTCAAAATCATTGAGAGATTGGCCACTCTTCATGTGTTGTCTTAGTCTTGCAATGTTTCCACTTGCTGCCTTTATAGTGGAGAAGTTGGCACAACAAAAGCGTGTTTCTGAACCAGTTGTTGTTTTACTTCATCTAATCATTACAACTGTTGAATTCTTCTATCCAGTTTTAGTAATCCTCAGGTGTGATTCTGCTTTTTTATCGGGTGTCACGTTGATGCTATTGACTTGCATTGTGTGGTTAAAATTGGTGTCATATGCACATACGAATTATGATATGAGAGCGCTTACCATTTCAAATGAAAAGGGAGAAGCATTGCCTCATACTTCGGATATGGAGTGCCCATACAATGTGAGCTTCAAGAGTATGGCATACTTCATGGTTGCTCCTACATTATGCTACCAGCCAAGCTATCCTCGCACACCCTCAGTTCGAAAGGGTTGGGTGTTTCGTCAACTTGTCAAGCTGATAATATTTACTGGAGTTATGGGATTTATAATAGAGCAATATATGAATCCTATTGTCAGAAATTCACAACATCCTTTTAAGGGAAACCTTCTATACGGCATTGAGAGAGTTCTCAAGCTTTCTGTTCCAAATGTATACGTGTGGCTCTGCATGTTCTACTGCTTTTTCCACCTTTGGTTAAATATACTTGCAGAGCTTCTCCGATTTGGAGATCGTGAGTTCTACAAAGATTGGTGGAATGCCAAAACTGTTGAAGAGTACTGGAGGATGTGGAATATGCCTGTGCATAAATGGATGGTTCGCCACATATATTTTCCATGCATAAGGAATGGCATCCCCAAGGGTGCTGCTGCATTAATTGCCTTCCTGGTTTCTGCTGTGTTCCATGAGGTGTGCATACTTGAGATGTAG 1368 0.4423 MAISDVPESLGTTAAAATVQSDSDLRQSSLRRRPSANSAGGLFDAETAAEDAVRDSGSDNSLNCKCSEEDKDHKPDHTAADNAVLKDVADRETVPDFKFTYRPSVPVHRKIKESPLSSDNIFKQSHAGLFNLCVVVLVAVNSRLIIENIMKYGWLIKSGFWFSSKSLRDWPLFMCCLSLAMFPLAAFIVEKLAQQKRVSEPVVVLLHLIITTVEFFYPVLVILRCDSAFLSGVTLMLLTCIVWLKLVSYAHTNYDMRALTISNEKGEALPHTSDMECPYNVSFKSMAYFMVAPTLCYQPSYPRTPSVRKGWVFRQLVKLIIFTGVMGFIIEQYMNPIVRNSQHPFKGNLLYGIERVLKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWMVRHIYFPCIRNGIPKGAAALIAFLVSAVFHEVCILEM. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03755 455 Pfam MBOAT, membrane-bound O-acyltransferase family 225 450 IPR004299 -
Seca6g03755 455 MobiDBLite consensus disorder prediction 1 61 - -
Seca6g03755 455 PIRSF Oat_ACAT_DAG_ARE 8 454 IPR014371 GO:0008374
Seca6g03755 455 PANTHER STEROL O-ACYLTRANSFERASE 74 452 IPR014371 GO:0008374
Seca6g03755 455 PIRSF Oat_dag 5 453 IPR027251 GO:0004144|GO:0019432
Seca6g03755 455 MobiDBLite consensus disorder prediction 11 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03755 Seca-Chr6 104848499 104859715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03755 96 452 Lipid Metabolism Gene Families AT2G19450 78.151 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03755 K11155 - gmx:547982 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03755 6 104848499 104859715 Seca6g03755 6 104848499 104859715 ECH
Seca12g00679 12 6138646 6146117 Seca6g03755 6 104848499 104859715 PCT