Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00679 ATGGCGATTTCCGAAGAGCCTGATAGTGCCGCCACTGCGTCCTTCCAAAGCGGCTCAGCTCTCAACCACTCTTCCGTGCGCCGGAGGCCTAGCGCCACTTCCACCGCTGACTTGTTCAATTCGTCTGCGACGGTCGATGGCGAGAGTTCGGCTGAAGAGTTGGTCAATGATTCCGGTTCCGACGACTCCATCAGCAGCGACCAAAACAACGCCGCCGCCAATCCAGAACAAAAACAAGTGCCTGATATTTCCGCCTTCAAATTCGCCTACCGTCCTTCCGTCCCCGCTCATCGAAGAGTAAAAGAAAGCCCTCTCAGCTCCGATAACATTTTCCGTCAGCTGCAGAGTCACGCGGGCCTCTTCAATCTCTGTATAGTAGTGCTTGTTGCCGTGAACAGCCGACTTATCATTGAGAATTTAATGAAGTACGGTTGGTTGATAAAGTCTGGCTTTTGGTTTAGTACAAAATCATTGAGAGATTGGCCCCTCTTCATGTGTTGTCTCTCTCTTGGTTTATTTCCCTTTGCTGCCTTTATAGTGGAAAAGTTGGTACAAAAAAAGTGTATTTCTGAACCAGTTGTTGTTCTACTTCATATAATCATTACAACAGCTGCAGTTTTCTATCCAGTTTTAGTAATCCTCAGGTGTGATTCTGCTTTTCTATCAGGCGTCACATTAATGCTACTTGCTTGCATTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTATGATATGAGAGCATATACCAAATCAATTGAGAAGGGAGAAGCACTGCCCAACACTCTGAATATGGACTACTATCCTTACGATGTGAGCTTCAAGAGCTTGGCATATTTTATGGTTGCTCCTACATTATGTTACCAGCCAACATATCCACGCACCCCTTCTATTCGAAAGGGTTGGCTGTTTCGTCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGTTTTATAATAGAACAATATATTAATCCGATTGTACAAAATTCACAGCATCCTTTGAAGGGAAACCTTCTATATGCCATCGAAAGAGTTCTGAAGCTGTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCACCTTTGGTTAAATATACTCGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAGGATTGGTGGAATGCCAAAACTATCGAAGAGTATTGGAGGATGTGGAATATGGTGAGTCTCTTTTTCAGACTTAATATTGATGACCAAGTTGGATAA 1257 0.432 MAISEEPDSAATASFQSGSALNHSSVRRRPSATSTADLFNSSATVDGESSAEELVNDSGSDDSISSDQNNAAANPEQKQVPDISAFKFAYRPSVPAHRRVKESPLSSDNIFRQLQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSTKSLRDWPLFMCCLSLGLFPFAAFIVEKLVQKKCISEPVVVLLHIIITTAAVFYPVLVILRCDSAFLSGVTLMLLACIVWLKLVSYAHTNYDMRAYTKSIEKGEALPNTLNMDYYPYDVSFKSLAYFMVAPTLCYQPTYPRTPSIRKGWLFRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTIEEYWRMWNMVSLFFRLNIDDQVG. 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00679 418 PIRSF Oat_ACAT_DAG_ARE 4 409 IPR014371 GO:0008374
Seca12g00679 418 MobiDBLite consensus disorder prediction 9 77 - -
Seca12g00679 418 Pfam MBOAT, membrane-bound O-acyltransferase family 268 405 IPR004299 -
Seca12g00679 418 PANTHER STEROL O-ACYLTRANSFERASE 48 405 IPR014371 GO:0008374
Seca12g00679 418 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00679 Seca-Chr12 6138646 6146117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00679 88 404 Lipid Metabolism Gene Families AT2G19450 76.972 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00679 K11155 - gmx:548005 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00679 12 6138646 6146117 Seca12g00679 12 6138646 6146117 ECH
Seca12g00679 12 6138646 6146117 Seca6g03755 6 104848499 104859715 PCT