Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03745 ATGGCAACATCCACCAAGTTTGATCTATCTTCCAGCAGCCCAGATAGACCATTGTACACTGGGCAGCGTGGATCCCACATAGCTGCTTCATTAGATAGATCAGGTAGCTTTCGTGAAAGCGTGGAAAATCAAATTCTGTCTTCTCCTCCAAACATGTCAAGAAGCAGTTCTTCAGCAACACAAGGGGATGTGGTGAGCTTCTTCAATTGTGTGCGTTTTGATCAAAAGTTGGTGGCTCCAGAGTACAAGTCTAATCGTCAAATAGATTATAAACGACATATCAGTGCTGCTCTTGGAATTTCACCTGATGAATCTCCATCTAGTTCTGTAAAAGGCAAGCAATTGCCATCCCCAGTACCAGAAGATATCAAACGACTCAGGGATGGTTTACACACAAACTTTAGAAGGGCAAGGGAACGTGCTAAAATGTTCAGTGAAGCCTTATCTAGATTCAACAAAGATTTCCCAAATATAACAACAAAGAAGAGATCTCGGGCAGAAAATTTTTCTAATGACCGTTCTAGTTTCACTGTAAGTGATCGGTCAGTCTTGGGGCCAAGCATTGGCAAGGTTGGAGTTCAAGGTCATGCTGTCACAGGTGGTTTCGAACACGAGCAGCAAAAGTTGGAAGAAAGAACCAAAACTGTTGTTCCAAACAAGCGCACTAGAACTTCTTTGGTTGATGTGAAGATGGACGTGCGGACTAATTCTCTTGTCAGGCCATCTGGAACGGTAGAAAGAGATAAAGAAATGCTACGGATTGTCAATAATGGTGCAGTTCAGGGTGAGGAACGAGCTTTACCTATTGGAGGTGATGGTTGGGAAAAGTCAAAAATGAAGAAGAAGCGTTCTGGCATCAAACCAGATGGGTCTCCGAGTCCAGCATTGACAAAGCCTGTAAACATTTTCCAGGAAACTAAACAAGGAATGCAACAAAGACTAGCTACTGATGCTCGGTCAAAATTGAATAATGATTCTCATTCTTTCAGGTCTGGGGTTTCAAATGGAACTGTCGGAGCTGGAAAATCAGATGGCATCTCTCAACAAACTGGGCTGGGCATACGTATGTCTACCCCTAGAAATGATCTGGATAACAATTCTTCCGTCAATGATAGGCGGGATCGTATTGTTAATTCAGACAAGGAAAGGGTGAATTTCAGAGCTGTTAACAAGGCAACTGTTCGTGATGAATTTAATTCATCTAGCCCTAATTCAAGTGCAAAAATGAATACTTCTATTCGGGCGCCACGATCAGGTTCAGGAGTTGCACCCAAGTTGTCACCAGTTGTCCATAGAGCAGCTGTTCCTAATGATTGGGAACTGTCTCATTGTAACACCAAGCCCCCTGCTGGTGTTGGCACTAACAATCGCAAACGTGCGGCATCAGCACGATCATCTTCCCCACCTGTTGTCCACTGGCAGAGACCACAAAAGAGCTCCCGCACTGCCAGAAGAACAAATTTTGTGCCTGTTGTTTCAAGTAATGATGATTCCCCTGCTTTGGACTCTGTATCTGATGTGACTGGTAATGATCTTGGGTTGGGATTTGCCAGACGTTTGGCTGGCAGTTCTCCGCAGCAAACTAAATTAAAAGGTGATTCTTTATCTTCAGCTGCCTTATCTGAAAGTGAAGAGTCAGGGGTAGCTGAGAATAAACCTAAAGAGAAGGGCAGGAAACCAGAGGAGATAGATCAAAAACCTGGACAAAATGTTCAAAAGCTTTCTAATTTGGTCCTTCCTACAAGGAAAAATAAGCTCGCCTCTAGGGAGGAACATGGAGATGGTGTTCGGAGGCAAGGGAGGACAGGACGCAATTTTCCTGCCACAAGGTCGCTGATGCCAATGACATCTGAGAAGCTTGGAAACTTAGGGACTGTAAAGCAACTTAGAAGTTCAAGACAAGGATTTGAGAAGAGTGAGAGCAAGGCAGGTCGTCCACCAACCAGGAAACTTTCTGATCGTAAGGCATATGCGCGTCAGAAGAATACAGCTATTAGTGCATCAGCAGATTTTCTTGTTGGATCAGAAGATGGACATGAAGAGCTATTGGCTGCTGTAAAGGGTGTTATCAACTCTGCTCAAGCTTTTTCCAGCCAATTCTGGAGGCAGATGGAGACTTTCTTTGGTTTGATAACTGAGGAGGATATTGCTTACTGGAAACAAAAGGTACTAGTTATTATGAGTGATGACTATGTTTCTGTTCTACATAAGAGTTTGTGTTGGATCAGTGAGATAAATCTTGAATCAAGTGGATTGATGCCAACTCCAGTTTCTTCAAATATAGATGACTGTGAAGCTGCTGTTAATGGGTTTGGGTTGACTGGCTGTGAAAGAGATATTGGACCTGATGCTCAAAGGGGTGCCGGAATTGTTACAGAACAGTTACAACTAGTTAAAGGAAATAGTAATGTAATTCCTCTCTGTGAAAGGCTGATATCTGCTTTCATCTCAGAGGAGTGTAGCAGTGAAAGTGAAGATCGCAAGTTTGATGCACATGATACTGAATTTGAGACGGACAGGGAGGTGGAACTGAGTCGTTTGGATCACCACTCACTGGCCAATTATCAGTTTGCTTGTCATGCTGCGTACAATGGTTATAGGATAACCGGGAAGCCAGAACATGATGAGACTGAAAATGTAGTTGATATTTCATCAACTGGGTTAAATTCAAGACAGAACATGCCTACCTTGACCTGTTCAGAGTTGGAATATGATACCTTGGATATGAATGAAAGGCTTCTGTTGGAGCTTCAAAGCATTGGAATTGTCCCAGAACCAGTGGTAAGTTACTTCCCAAAGAACTTTTGCCTGAAGTGTCACAAACAGATGATGAAGGAATTTGTGAGGATATCACAAGGTTAG 2862 0.4312 MATSTKFDLSSSSPDRPLYTGQRGSHIAASLDRSGSFRESVENQILSSPPNMSRSSSSATQGDVVSFFNCVRFDQKLVAPEYKSNRQIDYKRHISAALGISPDESPSSSVKGKQLPSPVPEDIKRLRDGLHTNFRRARERAKMFSEALSRFNKDFPNITTKKRSRAENFSNDRSSFTVSDRSVLGPSIGKVGVQGHAVTGGFEHEQQKLEERTKTVVPNKRTRTSLVDVKMDVRTNSLVRPSGTVERDKEMLRIVNNGAVQGEERALPIGGDGWEKSKMKKKRSGIKPDGSPSPALTKPVNIFQETKQGMQQRLATDARSKLNNDSHSFRSGVSNGTVGAGKSDGISQQTGLGIRMSTPRNDLDNNSSVNDRRDRIVNSDKERVNFRAVNKATVRDEFNSSSPNSSAKMNTSIRAPRSGSGVAPKLSPVVHRAAVPNDWELSHCNTKPPAGVGTNNRKRAASARSSSPPVVHWQRPQKSSRTARRTNFVPVVSSNDDSPALDSVSDVTGNDLGLGFARRLAGSSPQQTKLKGDSLSSAALSESEESGVAENKPKEKGRKPEEIDQKPGQNVQKLSNLVLPTRKNKLASREEHGDGVRRQGRTGRNFPATRSLMPMTSEKLGNLGTVKQLRSSRQGFEKSESKAGRPPTRKLSDRKAYARQKNTAISASADFLVGSEDGHEELLAAVKGVINSAQAFSSQFWRQMETFFGLITEEDIAYWKQKVLVIMSDDYVSVLHKSLCWISEINLESSGLMPTPVSSNIDDCEAAVNGFGLTGCERDIGPDAQRGAGIVTEQLQLVKGNSNVIPLCERLISAFISEECSSESEDRKFDAHDTEFETDREVELSRLDHHSLANYQFACHAAYNGYRITGKPEHDETENVVDISSTGLNSRQNMPTLTCSELEYDTLDMNERLLLELQSIGIVPEPVVSYFPKNFCLKCHKQMMKEFVRISQG. 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03745 953 MobiDBLite consensus disorder prediction 36 59 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 568 582 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 269 287 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 440 484 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 1 59 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 547 566 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 321 365 - -
Seca6g03745 953 PANTHER OS05G0107300 PROTEIN 1 927 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 448 484 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 1 19 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 99 121 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 584 599 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 266 298 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 395 427 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 521 544 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 633 654 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 520 654 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 321 371 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 395 417 - -
Seca6g03745 953 MobiDBLite consensus disorder prediction 604 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03745 Seca-Chr6 104750072 104763411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03745 - - gmx:100812435 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03745 6 104750072 104763411 Seca6g03745 6 104750072 104763411 ECH
Seca12g00672 12 6048707 6060422 Seca6g03745 6 104750072 104763411 PCT