Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00672 ATGGCAACATCTAGCAAGTTTGATCCATCTTCTAGTAGCCCAGATAGACCATTGTATACTGGGCAGCGTGGATCCCACATAGCTGCATCCTTAGATAGATCAGGTAGCTTTCGTGAAAGCATAGAAAATCCAATCATGTCAAGAAGCAATTCTCCAGCAACACACGAGGATGTGGAGAGCTTCTTCAATTATGTGCATTTTGACCCAAAGTTGTTAGCGCTAGACAATAAGTCTAATCGTCAAAACGATTATAAGCATATTATTGCTGCTCTTGGAATTTCAACTGATGAATCTCCATCTAGTTCTGCAAAAGGCAAGCTACTGCCGTCCCCAGTACCAGAAGACATCAAACGACTCAAGGATAGTTTGTATGCAATCACTGTGAAGGAGAGGGAACGTTCGAAAATGTTCACCGAGGCCTTATCTGTATTCCAAGAAGTTTTCCCACCTGTACCTTCGAAGAAGAGATCTCGGGCTGAAGGCTTTTCCAATGAACGTTCTAGTGCCATGTTAGGTGATCGCTCAGTTTTGGGGCCTAGCATAGGTAAGGCTGGAGTTCAAGGTCATCCTGTCACAGGTGCTTTTGAACTTGAACAGCAAAAGTCAGAAGAACGGGCCAAAAATCTTGTTCCAAACAAGCGCACTCGAACTTCTATGGTTGATGTAAGGATGGATGCGCGGACTAATTCTCTTGTCAGGCCATTGGGGACTGTTGATAGAGATAGAGATAAGGAAAAGCCACGGATTGCCAATAGTGGTGTGGTTCAGAGTGAAGAACGAACCTTATCTATTGGAGGTGAAGGTTGGGAAAAGTCGAAAATGAAAAAGAAGCGTTCCTGCATCAAACTAGATGGTTCTCCAAGTACAACACTGACTAAACCTGTTAACGGCTTCCAGGAAGCTAAACAGGGAATGCAACAAAGACTTGCTACTGATTCTCGGTCAAAATTGGGCAATGATTCTCATTCTTTTAGGACGGGAGTTTCTAATGGAACTGTTGGAGCTGGCAAATCAACTGTTGGAGCTGGCAAATCAGATGGTATATCTCAACAGACTGGATTGGGTTTACGTGCGTCTACCCCTAGAAACGACCAAGATAATAATTCTCTTGTCAGTGATAGGCGGGGTCGTCCTGTTAGTTTAGACAAGGAAAGGATGAACTTCAGAGCTGTTAACAAGGCAACTGTTCGTGATGAGTTTAATTCAGCTAGCCCTACCTCAAGTACAAAAATGAATACCGCCATTCGGGCTCCACGATCAGGTTCAGGTGTTGCTCCCAAGATGTCACCAGTTGTCCATAGAGCATCTGTTCCTAATGATTGGGAGTTGTCTCATTGCGCCACAAAACCCCCTGCTGGTGTTGGTACTAGCAATCGCAAACGTGCACCTTCCTCACCTGTTGTCCCCTGGCACAGGCCACATAAGAGCTCCCGCACTGCCAGAAGAACAAATTTCATGCCCATTGTTTCAAATAATGATGAAGCTCCTACTTTGGATGCTGTGTCTGATGTGGCTGGTAATGATCTTGGGTTAGGATTTGCCAGACGCTTGGCTGGCAGTTCTCCTCAGCAAATTAAAGTAAAAGGTGAACCTTCATCTTTAACTCCCTTGTCTGAAAGTGAAGAGTCAGGGGCAGCTGAGGTTAAACCAAAAGAAAAAGGAAGGAAACCAGAAGAGATAGATCTGAAAGCTGGACAAAATGTTCCAAAGGTGTCTAACTTGGTATTGCCAACAAGAAAGAACAAGCTTGTTTCGGGGGAAGAACATGGAGATGGTGTTCGGAGGCAAGGGAGGACAGGACGTGGTCTTATGACCACAAGGTCATTGATGCCAATGACATCTGAGAAGCTTGGAAATATAGGAACTGCAAAACAACTTAGAAGTGCAAAACTAGGATCTGATAAGAATGAAAGCAAGGCAGGTCGTCCACCAACCAGGAAGCTTTCTGATCGTAAGGCTTATGCACGTCAAAAGCCTACTACTGTTAATGCAGCAGCAGACTATTTTGTTGGGTCAGAAGATGGACATGAAGAGCTATTGGCTGCTGTCAAGGGTGTTATCAACTCTGCTCATACCTTTTCCAGCCCATTTTGGAGGCAGATGGAGCCTTTCTTCAATTTGATATCTGAGGAGGATATTACTTACTGGAAGCAAAAGGTAAATCTTGAATCAAGCACACTGATGCCATCTCCAGTTCCTTCAAATATAGATGGTTGTGAAGCCATTGTTAACGGATATGGGTTGATTGGCTGTAAAAGAGATGTTGGGCCAGATGCTCAACGGAGTGCTGCAATGACTACAGAACAGTTACAACCATCCAAGGGAGATCATAAAATTCCTCTGTGTCAAAGGCTTATAGCTGCTTTAATCTCAGAGGAGGATTGTAGTAGTGGAAATGAAGATTCTGCATATGATACTGAATTTGAGCCTGATGGGAAATTGGAGTTGAGTGGTTTGGATCACCACTCACTGATTGCCTGTCATTCTGCTTATAATGGTTATAGGATTAATGGGAAGCCAGAACATGATGAAACTGATATAGTTGATATTCCTCCAACTGGGTTGAAGTCATGCATTGGCAACTCTGTAAATGGTTTTGTTCATGATAAAGCATTAATATCTGGCTTGGCCTGTTCAGAGTTGCATTATGATAGCTTGGATATAAATGATAAGCTTCTCTTGGAGCTTCAAAGTATTGGACTTTCCCCTGAACCAGTGCCTGAAATGTTTCAAGCAGATGATGAAGGAATATTGGAGGATATTACTAGGTTAGAGGAGCTTTACCAAGGACAGATTTCCAAGGAGAAAGGCTTGCTAGATGGATTGTTGAAGTCTGCCTCAGTGGCAAAAGAACTTCAAGAGAAGGATTTTGATCAACGTGCTCTAGAAAAACTCGTCGTGATGGCTTATGAGAAATACATGGCCTGTTGGGGTCCTAGTCCCTCAGGTGGGAAAAATACAAGCAACAAAATGGCCAAGCAAGCTGCATTGGGATTTGTTAAACGGACATTGGAGCGATGCCACCAATTTGAAGATACAGGCAAGAGCTGCTTCAGCGAGCCTTTATTCAAGGATATGTTCCTTGCTGCTTGTTCTCAGCCTAGTATTGCTCGGCAATCAGATGGAATGGAGGCTGACTCCTCAAAACCATATGCTTCTTTCCTTTCTGCGGAAGCAAGAACAGCTTCCATTGGTTCACAGCAGAGCCCATTACAATTTAGTCAGAATATGGATAACCATGATCTCAATGCATTAGATATGCTTCCTGCTTTAAATCAGCCATCTGAACAAACTAGTGGGAAGGAAGATCTCTGGTCCAACAGAGTGAAGAAGAGGGAATTGTTCCTTGATGATGTTGGTGGTACTCAAGGTACTTCGAGTGCTCCAGGCATTGGAAATTCTCTAACAAGCAATGCAAAAGGAAAGAGGAGTGAGAGGGAAAGAGATGGAAAGGGGCACAGCAGAGAGGTACTATCCAGAAATGGAACTACCAAAGTTGGTAGGCCAGCATCATCCTCTGCTAAGGGTGAAAGAAAATCCAAAACAAAGCCTAAGCAAAAAGCAACTCAGCATTCTGTTTCTGTAAATGGCCTCCTTGGCAAGCTATCTGAGCAACCAAAACCAGCATTGCCTTCTGTTTCAAAGTCTAATGAAATGTCTACTAATAGCAATGCCAAGGAAAAGGATGAGTTTGGCTTGGGTGGATTGGATGACCATGAGCCAATTGATTTGTCCAACCTGCAGCTACCTGGAATGGATGTACTTGGTGTTCCCGATGACCTTGCTGACCAAGGTCAGGATCTTGGTTCATGGTTGAATATTGATGACGATGGATTACAAGATCATGATTTTATGGGCCTTGAAATTCCCATGGATGACCTTGCAGACTTGAATATGATGATACACACCTCAACGGGATGTGGTGCAAGTGGTTTGCTGCAGTGGCTTCATCCAAACCCAGTTGCTGCCCTGCTTTTGTTACTTAGGATATTTGATGCAGATTCTGGAGATTCCGTTTCAGGTGAATTACAACATTTGAAGATTGAAGGGTCTTCATGTTAG 4062 0.4365 MATSSKFDPSSSSPDRPLYTGQRGSHIAASLDRSGSFRESIENPIMSRSNSPATHEDVESFFNYVHFDPKLLALDNKSNRQNDYKHIIAALGISTDESPSSSAKGKLLPSPVPEDIKRLKDSLYAITVKERERSKMFTEALSVFQEVFPPVPSKKRSRAEGFSNERSSAMLGDRSVLGPSIGKAGVQGHPVTGAFELEQQKSEERAKNLVPNKRTRTSMVDVRMDARTNSLVRPLGTVDRDRDKEKPRIANSGVVQSEERTLSIGGEGWEKSKMKKKRSCIKLDGSPSTTLTKPVNGFQEAKQGMQQRLATDSRSKLGNDSHSFRTGVSNGTVGAGKSTVGAGKSDGISQQTGLGLRASTPRNDQDNNSLVSDRRGRPVSLDKERMNFRAVNKATVRDEFNSASPTSSTKMNTAIRAPRSGSGVAPKMSPVVHRASVPNDWELSHCATKPPAGVGTSNRKRAPSSPVVPWHRPHKSSRTARRTNFMPIVSNNDEAPTLDAVSDVAGNDLGLGFARRLAGSSPQQIKVKGEPSSLTPLSESEESGAAEVKPKEKGRKPEEIDLKAGQNVPKVSNLVLPTRKNKLVSGEEHGDGVRRQGRTGRGLMTTRSLMPMTSEKLGNIGTAKQLRSAKLGSDKNESKAGRPPTRKLSDRKAYARQKPTTVNAAADYFVGSEDGHEELLAAVKGVINSAHTFSSPFWRQMEPFFNLISEEDITYWKQKVNLESSTLMPSPVPSNIDGCEAIVNGYGLIGCKRDVGPDAQRSAAMTTEQLQPSKGDHKIPLCQRLIAALISEEDCSSGNEDSAYDTEFEPDGKLELSGLDHHSLIACHSAYNGYRINGKPEHDETDIVDIPPTGLKSCIGNSVNGFVHDKALISGLACSELHYDSLDINDKLLLELQSIGLSPEPVPEMFQADDEGILEDITRLEELYQGQISKEKGLLDGLLKSASVAKELQEKDFDQRALEKLVVMAYEKYMACWGPSPSGGKNTSNKMAKQAALGFVKRTLERCHQFEDTGKSCFSEPLFKDMFLAACSQPSIARQSDGMEADSSKPYASFLSAEARTASIGSQQSPLQFSQNMDNHDLNALDMLPALNQPSEQTSGKEDLWSNRVKKRELFLDDVGGTQGTSSAPGIGNSLTSNAKGKRSERERDGKGHSREVLSRNGTTKVGRPASSSAKGERKSKTKPKQKATQHSVSVNGLLGKLSEQPKPALPSVSKSNEMSTNSNAKEKDEFGLGGLDDHEPIDLSNLQLPGMDVLGVPDDLADQGQDLGSWLNIDDDGLQDHDFMGLEIPMDDLADLNMMIHTSTGCGASGLLQWLHPNPVAALLLLLRIFDADSGDSVSGELQHLKIEGSSC. 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00672 1353 PANTHER OS05G0107300 PROTEIN 1 1301 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 400 429 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 1222 1237 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 450 478 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 400 416 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 1120 1139 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 525 540 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 601 621 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 1 19 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 1 53 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 1140 1158 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 520 562 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 310 376 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 585 655 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 36 53 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 1117 1244 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 630 654 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 310 336 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 343 367 - -
Seca12g00672 1353 MobiDBLite consensus disorder prediction 544 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00672 Seca-Chr12 6048707 6060422 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00672 - - gmx:100805358 2043.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00672 12 6048707 6060422 Seca12g00672 12 6048707 6060422 ECH
Seca12g00672 12 6048707 6060422 Seca6g03745 6 104750072 104763411 PCT